Pairwise Alignments

Query, 736 a.a., bacteriophytochrome protein from Agrobacterium fabrum C58

Subject, 1029 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  169 bits (429), Expect = 5e-46
 Identities = 104/255 (40%), Positives = 137/255 (53%), Gaps = 6/255 (2%)

Query: 474  ELAAARELRGAIIGIVLRKTEEMADLTRELQRTNKELEAFSYSVSHDLRAPFRHIVGFAQ 533
            E+AA  ++R     +  R  E     T EL   N ELE F+Y+VSHDLRAP R I GF+Q
Sbjct: 778  EVAAEEQIRQFNDSLERRVKER----TAELAAANHELEGFAYAVSHDLRAPLRAITGFSQ 833

Query: 534  -LLRERSDALDEKSLHYLQMISEAALGAGRLVDDLLNFSQLGRTQLTLKPVDMQKVVSEV 592
             LL +  D L+ ++  +L  I       G L+D LL  S+  R +L  +PVD+  +   +
Sbjct: 834  ALLEDYGDKLEGEAREFLDEIIRGGRHLGELIDGLLTLSRCTRGELRREPVDISALAEAM 893

Query: 593  RRSLSHAVSDRQIEWRIGALPVIFGDPTLLRQVWYNLIENAIKYSSREPVSIITISAVE- 651
             R +            +     + GDP +L  V  NL+ENA KYS+ +    I + A   
Sbjct: 894  AREIRSHQRGAHFTLEVEPGIQVHGDPAMLEVVMRNLMENAWKYSAHQKAPHIRVYADSI 953

Query: 652  TEDDVTYSVEDNGVGFDMAYYNKLFGVFQRLQRVEDFEGTGIGLALVRRIVERHHGLVGA 711
            T D V + V DNG GFDM Y NKLF  FQRL R  +F GTGIGLA V+RI+ RH G + A
Sbjct: 954  TADTVAWCVADNGAGFDMNYANKLFKPFQRLHRQSEFAGTGIGLATVQRIIHRHGGDITA 1013

Query: 712  EGTVGEGATFSFTLP 726
               V +GA F  TLP
Sbjct: 1014 SSAVNQGAVFRITLP 1028