Pairwise Alignments

Query, 736 a.a., bacteriophytochrome protein from Agrobacterium fabrum C58

Subject, 999 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  212 bits (540), Expect = 7e-59
 Identities = 119/236 (50%), Positives = 150/236 (63%), Gaps = 5/236 (2%)

Query: 496 MADLTRELQRTNKELEAFSYSVSHDLRAPFRHIVGFAQLLRERSD-ALDEKSLHYLQMIS 554
           +A+ T +L   NKELEAFSYSVSHDLRAP RH+ GF  LL   +D  L E S  YL +I+
Sbjct: 761 VAERTDQLAVANKELEAFSYSVSHDLRAPLRHVSGFVSLLEADADNRLSEASRRYLNIIT 820

Query: 555 EAALGAGRLVDDLLNFSQLGRTQLTLKPVDMQKVVSEVRRSLSHAVSDRQIEWRIGALPV 614
           EAA   G L+D LL FS++GR ++   PVD+ K++ EV   L+       ++W IG+LP 
Sbjct: 821 EAANRMGDLIDGLLAFSRIGRAEVHKTPVDLNKLLQEVIDDLAQEPRAPAVDWAIGSLPQ 880

Query: 615 IFGDPTLLRQVWYNLIENAIKYSSREPVSIITISAVETEDDV----TYSVEDNGVGFDMA 670
           +  D TL+RQV  NL+ NA+KYS +   + I I+A   E +        + DNGVGF+M 
Sbjct: 881 VLADRTLIRQVLANLVGNALKYSRKRERAQIHIAAESGEHEGRPEWVIRIADNGVGFNMK 940

Query: 671 YYNKLFGVFQRLQRVEDFEGTGIGLALVRRIVERHHGLVGAEGTVGEGATFSFTLP 726
           Y  KLFGVFQRL    DFEGTGIGLA VRR+VERH G   AE     GATF F+LP
Sbjct: 941 YVGKLFGVFQRLHGAADFEGTGIGLANVRRVVERHGGRTWAEAEPDRGATFYFSLP 996