Pairwise Alignments

Query, 180 a.a., sigma factor from Agrobacterium fabrum C58

Subject, 202 a.a., Sigma-70 region 2:Sigma-70 region 4 from Pseudomonas syringae pv. syringae B728a

 Score = 80.1 bits (196), Expect = 2e-20
 Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 16/167 (9%)

Query: 17  DRSAFVSLYQATSPKLFAICLKILRDRTEAEEALQEIYIKVWQRARTFAVSAGKPATWLA 76
           DR +F+ +Y   +P+L      +     +AEE +QE+ +K+W +A +F  +     TWL 
Sbjct: 38  DRDSFMRIYDHFAPRLLRYLTGLNVPEGQAEELVQEVLLKLWHKADSFDPAKASLGTWLF 97

Query: 77  TIARNHAIDTIRARKPASDDIDEAYDLVDESIRDPEQQVVLVD--------EGRRIDDCM 128
            IARN  ID++R         D  +  V  S+   E+    VD        + ++++  +
Sbjct: 98  RIARNLYIDSVRK--------DRGWVQVQNSLEQLERLEAPVDRTLDYSQRQEQQLNIAI 149

Query: 129 RELETVHAQAVRRAYVEGLSYLELSDELRVPLNTVRTWLRRSLLKLR 175
           + L    A+ +R +Y E LS+ E+S+ L +PL TV++ LR +  KLR
Sbjct: 150 QNLPADQARVLRMSYFEALSHREISERLGMPLGTVKSCLRLAFQKLR 196