Pairwise Alignments

Query, 180 a.a., sigma factor from Agrobacterium fabrum C58

Subject, 215 a.a., DNA-directed RNA polymerase sigma-70 factor from Ralstonia solanacearum IBSBF1503

 Score =  127 bits (319), Expect = 1e-34
 Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 7/179 (3%)

Query: 6   IATLINRVGMGDRSAFVSLYQATSPKLFAICLKILRDRTEAEEALQEIYIKVWQRARTFA 65
           +A L+ R+G+GDR A  +LY   +PKLF + L+IL  +  AE+ LQE ++ +W+ A  + 
Sbjct: 35  LAALLQRIGLGDRDALRTLYACCAPKLFGLALRILARKDWAEDVLQESFVNIWRHAGDYR 94

Query: 66  VSAGKPATWLATIARNHAIDTIR----ARKPASDDIDE--AYDLVDESIRDPEQQVVLVD 119
                P TW+ TI RN A+D +R     R  AS  +DE  A  LVD +   P    +   
Sbjct: 95  PHLAAPMTWMTTIVRNRALDCLRRQRAERVQASVPLDETDAAALVDHA-PGPADLALAGQ 153

Query: 120 EGRRIDDCMRELETVHAQAVRRAYVEGLSYLELSDELRVPLNTVRTWLRRSLLKLRECM 178
           + R + +C++ L+    + V  AY+  LS+ EL+  L VPL TV++W+RR L +LREC+
Sbjct: 154 QARALAECLKRLDPKQREVVSLAYLRDLSHSELAQTLSVPLGTVKSWMRRGLDRLRECL 212