Pairwise Alignments

Query, 180 a.a., sigma factor from Agrobacterium fabrum C58

Subject, 201 a.a., RNA polymerase subunit sigma-24 from Cupriavidus basilensis FW507-4G11

 Score =  120 bits (300), Expect = 2e-32
 Identities = 61/180 (33%), Positives = 102/180 (56%), Gaps = 7/180 (3%)

Query: 6   IATLINRVGMGDRSAFVSLYQATSPKLFAICLKILRDRTEAEEALQEIYIKVWQRARTFA 65
           +A L+    MGDR A   LY  T+ KLF + L+I      AE+ +QE ++ +W  A  + 
Sbjct: 20  LAALLQGAAMGDRHALRQLYDQTATKLFGLALRITNRHDWAEDVVQESFVSIWHHAGDYR 79

Query: 66  VSAGKPATWLATIARNHAIDTIR----ARKPASDDIDEAYD--LVDESIRDPEQQVVLVD 119
                P TW+  I RN A+D +R    AR   + ++D+     L DE+   P +  +   
Sbjct: 80  PHLAAPMTWMTAIVRNRALDCLRRQAAARTSQTVELDDNLGEWLADEA-AGPAELALASQ 138

Query: 120 EGRRIDDCMRELETVHAQAVRRAYVEGLSYLELSDELRVPLNTVRTWLRRSLLKLRECMQ 179
           + R ++ C++ LE    QA+  AY++ +S+ ELS++L+VPL T+++W+RR L +LR C++
Sbjct: 139 QARALNQCLQRLEQPQRQAISLAYLKDMSHSELSEQLQVPLGTIKSWIRRGLERLRTCLE 198