Pairwise Alignments

Query, 391 a.a., elongation factor TU from Agrobacterium fabrum C58

Subject, 428 a.a., translation elongation factor EF-1 subunit alpha from Methanococcus maripaludis S2

 Score =  189 bits (479), Expect = 2e-52
 Identities = 148/437 (33%), Positives = 215/437 (49%), Gaps = 71/437 (16%)

Query: 8   RNKPHVNIGTIGHVDHGKTSLTAAITKYFGE--------------------FKAYDQIDA 47
           + KP +N+  IGHVD GK++    +    G                     F+    +D 
Sbjct: 3   KEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDG 62

Query: 48  APEEKARGITISTAHVEYETPARHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAAD-- 105
             EE+ RG+TI  AH ++ T       VDCPGH D++KNMITGA+Q D A+LV +  D  
Sbjct: 63  LKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAK 122

Query: 106 -GPMPQTREHILLARQVGVPAIVVFLNKVDQVD--DAELLELVELEVRELLSSYDFPGDD 162
            G  PQTREH+ L+R +G+  + V +NK+D V+  +A+  E+ ++   +LL    F  D+
Sbjct: 123 SGIQPQTREHVFLSRTLGITQLAVAINKMDTVNFSEADYNEMKKMLGDQLLKMVGFNPDN 182

Query: 163 IPIIKGSALAALEDSDKKIGEDAI----RELMAAVDAYIPTPERPIDQPFLMPIEDVFSI 218
           I  I  ++L  L D+  K  E+        L   +D + P PE+P   P  +PI+DV+SI
Sbjct: 183 IDFIPVASL--LGDNVFKKSENTPWYNGPTLAQVIDGFQP-PEKPTTLPLRLPIQDVYSI 239

Query: 219 SGRGTVVTGRVERGIVKVGEEV--EIVGIRPTSKTTVTGVEMFRKLLDQGQAGDNIGALV 276
           +G GTV  GRVE GI+K G++V  E  G     KT    VEM  + L   + GDNIG  V
Sbjct: 240 TGVGTVPVGRVETGIIKPGDKVVFEPAGAVGEIKT----VEMHHEQLPSAEPGDNIGFNV 295

Query: 277 RGVTRDGVERGQIL---CKPGSVKPHKKFMAEAYILTKEEGGRHTPFFT-NYRPQFYFRT 332
           RGV +  ++RG +L     P +V     F A+  +L      +H    T  Y P F+  T
Sbjct: 296 RGVGKKDIKRGDVLGHTTNPPTVA--ADFTAQIVVL------QHPSVMTVGYTPVFHAHT 347

Query: 333 TDV--------------TGIVSLPEGTEMVMPGDNVTVEVELIVPIAME------EKLRF 372
             +              TG V L E  + +  GD   V++    P+ ME      +  RF
Sbjct: 348 AQIACTFMELQKKLNPATGEV-LEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRF 406

Query: 373 AIREGGRTVGAGIVASI 389
           AIR+ G TV AG+   +
Sbjct: 407 AIRDMGMTVAAGMAIQV 423