Pairwise Alignments

Query, 391 a.a., elongation factor TU from Agrobacterium fabrum C58

Subject, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis S2

 Score =  140 bits (354), Expect = 6e-38
 Identities = 89/281 (31%), Positives = 151/281 (53%), Gaps = 21/281 (7%)

Query: 12  HVNIGTIGHVDHGKTSLTAAITKYFGEFKAYDQIDAAPEEKARGITISTAHVEYETPARH 71
           ++N+G  GH+DHGKT+L+  +T+      A+D++   PE + RGITI      ++     
Sbjct: 5   NINLGIFGHIDHGKTTLSKVLTE-IASTSAHDKL---PESQKRGITIDIGFSAFKLENYR 60

Query: 72  YAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQVGVPAIVVFLN 131
              VD PGHAD ++ +++ A  +D A++V  A +GP  QT EH+L+     +P IVV + 
Sbjct: 61  ITLVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIPIIVV-IT 119

Query: 132 KVDQVDDAELLELVELEVRELLSSYDFPGDD--IPIIKGSALAALEDSDKKIGEDAIREL 189
           K D     E ++  E+ ++ +L S     +   IPI   +     E  +  I      E+
Sbjct: 120 KSDNAGTEE-IKRTEMIMKSILQSTQNLKNSSIIPISAKTGFGVEELKNLIINTLNNAEI 178

Query: 190 MAAVDAYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIRPTS 249
           +   ++Y           F MP++  F I G GTVVTG + +GIVKVG+E++++ I  ++
Sbjct: 179 IRNTESY-----------FKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLPINMST 227

Query: 250 KTTVTGVEMFRKLLDQGQAGDNIGALVRGVTRDGVERGQIL 290
           K  V  ++ F++ + + +AGD +G  ++GV    + RG IL
Sbjct: 228 K--VRSIQCFKESVMEAKAGDRVGMAIQGVESKQIYRGCIL 266