Pairwise Alignments

Query, 189 a.a., 30s ribosomal protein S5 from Agrobacterium fabrum C58

Subject, 225 a.a., 30S ribosomal protein S5 from Methanococcus maripaludis S2

 Score = 80.9 bits (198), Expect = 2e-20
 Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 10/145 (6%)

Query: 24  DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATESAKRDLI 83
           ++++ +  V ++ K GRR  + A VVVG++ G VG G GK++EV  AIRKA   AK  LI
Sbjct: 59  EQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLI 118

Query: 84  FVPLRDG---------RTLHHDVNGRHGAGKVLLRSAKAGTGIIAGGPMRAVFETLGVHD 134
            V +  G          ++     G  G+ KV L  A  G G++AG   +AV    GV D
Sbjct: 119 KVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKD 178

Query: 135 VVAKSTGSS-NPYNMVRATFDALKH 158
              K+ G +   YN   ATFDAL +
Sbjct: 179 AWTKTFGDTRTTYNFAEATFDALNN 203