Pairwise Alignments

Query, 468 a.a., htrA family protein from Agrobacterium fabrum C58

Subject, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

 Score =  269 bits (687), Expect = 2e-76
 Identities = 174/466 (37%), Positives = 264/466 (56%), Gaps = 31/466 (6%)

Query: 4   VLKYLSTGFLAALVLLPVGARAQDNKTVPASHTEMQL-SFAPLVKRTAGAVVNVYAERV- 61
           VL  LS    A L  LP  A       +P S    Q+ S AP++++   AVV++  E   
Sbjct: 8   VLTALSLSLSAILSPLPATA------ALPLSVNGEQIPSLAPMLEKVTPAVVSIAVEGTQ 61

Query: 62  VQRRVSPFAGDPFFEQFFGQQMPNRTEKQS---SLGSGVIVTAG-GLVVTNNHVIDGADD 117
           V R+  P      F  FFG   P    ++     LGSGVI+ A  G VVTN HVI+GA+ 
Sbjct: 62  VSRQRLPDQ----FRFFFGPDFPTEQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEK 117

Query: 118 IKVALADGREFSSKVLMKDDRVDLAVLQIDAKEQFPVLSLGDSDKIEVGDLVLAIGNPFG 177
           I+V L DGREF ++++  D+  D+A+L+++  +    + + DSDK+ VGD  +AIGNPFG
Sbjct: 118 IRVKLYDGREFDAELVGGDEMSDVALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFG 177

Query: 178 VGQTVTSGIVSGLARNQVTQGDFGFFIQTDASINPGNSGGALMNMAGELVGINTAIFSKG 237
           +GQTVTSGIVS L R+ +   +F  FIQTDA+IN GNSGGAL+N+ GEL+GINTAI    
Sbjct: 178 LGQTVTSGIVSALGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPN 237

Query: 238 GGSNGIGFAIPANLVRVFV-AAAERGDANFQRPYIGATFDPVTSDVAEALGLHRARGALV 296
           GG+ GIGFAIP+N+++       E G+   +R  +G     +TS++A+ALG   ++GA V
Sbjct: 238 GGNVGIGFAIPSNMMKNLTDQILEFGEV--KRGMLGVQGGEITSELADALGYESSKGAFV 295

Query: 297 VGVTKGGPAEKAGIEPGQVVTAVNGLEVEHPDALGYRLTTAGIGKSAELTVVEKGKEKKL 356
             V     A+KAGI+ G ++T++NG +++    L  ++ T G GK+  L V+  GK + +
Sbjct: 296 SQVVPDSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNI 355

Query: 357 TIALNTAPETAPRDERLLEGRNPFAGATVANLSPKLADELRMPSQVTGVVITDVKRGSPA 416
            + L        + E L +G    +GA ++N +            + GV +T+V++GS A
Sbjct: 356 DVTLGEQQNAKTKAESLHQG---LSGAELSNTTDS--------DPIQGVKVTEVQKGSAA 404

Query: 417 YRVGFQPKDVILSLNGADIGSTAAVEKALDDNPGFWRVEILRDGQR 462
                Q  D+I+ +N   + + A +   ++ +P    + I R G+R
Sbjct: 405 ESYQLQKDDIIIGVNRKRVKNIAELRAIMEKSPNILALNIQR-GER 449