Pairwise Alignments

Query, 604 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

Subject, 626 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  260 bits (664), Expect = 1e-73
 Identities = 193/631 (30%), Positives = 299/631 (47%), Gaps = 74/631 (11%)

Query: 6   ISMRLYALVALFLAILAAALTFSLFESYRE-MERERKAGLAAMNETAVAIIKQYYQLEQG 64
           +  RL  LV   +A+    +   +  +  + +   R   L  M +    ++++Y    Q 
Sbjct: 23  VGARLLLLVGGIVALFVLTIFVGILPTVEQRLLAARGDALRNMIQNVDKLLQEYDARVQK 82

Query: 65  GSLTREAAQQQAKTTIAAMRYGNGSGYFWINDM---HPTMVMHPIKPEMNGTDLTA---- 117
           G  TRE   ++A   I +MRYGN   YFWIND    +PTM+MHP+  ++ G  L +    
Sbjct: 83  GEFTREEGMKRAALRIGSMRYGNND-YFWINDTGTPYPTMIMHPVATQLVGKVLDSPNYQ 141

Query: 118 -------------NKDPNGKALFVEFVNTVKAGGQGFVDYYWPKP-----GAPDPVEKFS 159
                        N  P GK LF  FV+ V+  G G V Y WPKP      + +   K S
Sbjct: 142 RATGWRTAPGEDFNAYPAGKNLFQAFVDVVQRNGSGLVSYAWPKPLPGGGASSELYNKES 201

Query: 160 HVAGFAPWGWIVGTGVYVDDLE----AVFWRDAYFNGGLCVVVGLLVVGVAAFVVRSVTR 215
           +V  F PWGWIVGTGVYVDD+E    A+  R    +GG+     LLV      ++RS+ R
Sbjct: 202 YVTLFRPWGWIVGTGVYVDDIERDVTALRLRVLTLSGGIL----LLVCAFGWILIRSIRR 257

Query: 216 PIDLIRQSMKRIADGDGAAEIQFADRGDEIGAIAKTLLVLRDSVNERSALQAREADQQRA 275
           P+D +    +++ADGD  A +  +    E G +  +L  + +      AL+ + A+ Q  
Sbjct: 258 PLDSLASYARKVADGDLGAHVSGSFIA-EFGELKHSLETMVE------ALRTKIAEAQEK 310

Query: 276 LEEARHGNEMVLRSASERQAHAMERLGHALE-ALANGDLTVELADIGSDYEKLRVDFNRA 334
            +EA      ++   +E Q HA E      E A + G     + D  +  E +  D  RA
Sbjct: 311 TDEAS-----IMARRAEEQTHAAEAAREEAERARSEG-----MVDAANQLEAIVRDVGRA 360

Query: 335 VGALHGAIEAIARTGQVVNDSASDISGATGNLSRRTEQQAAALEETAAALDEITATVRTA 394
             AL G +   A       + A       G  S   E+  A + + A    +   T   A
Sbjct: 361 ASALTGLVRVAA-------EGAGRQRARVGETSVSMEEMNATVLDVARNAGQAATTSEAA 413

Query: 395 SERANEARQMVQDTKTSAGRSGEIVRNAVDAMGRIEDSSKRIGQIISVIDEIAFQTNLLA 454
             +A +    V+    S  +      +  ++MG +   +  IGQI+SVI +IA QTNLLA
Sbjct: 414 RAKAQQGAGGVEQVVASVAQVEREAASLRESMGALSKRADAIGQIMSVISDIADQTNLLA 473

Query: 455 LNAGVEAARAGEAGRGFAVVAQEVRELAQRSANAAKEIKTLI--------------NRSA 500
           LNA +EAARAGEAGRGFAVVA EVR+LA+++ NA KE+ + I              + ++
Sbjct: 474 LNAAIEAARAGEAGRGFAVVADEVRKLAEKTMNATKEVDSAIRGIQQGTGESSRNVDAAS 533

Query: 501 EEVGGGVALVRSTGDALDEIVALVNRVDGHVNSIATAAREQATGLQEINTSVNHMDQMTQ 560
             VG      R+ G++L EIV L  +V   + SIATA+ EQ++  + I  +++ +  +  
Sbjct: 534 RAVGEAAEHARAAGESLGEIVRLAEQVSDQIRSIATASEEQSSSSESIAHALDGVAGVAD 593

Query: 561 QNAAMVEETTAASQTLAEESQQLRALLSRFE 591
             +  +++   + + L   +  L  L+ R +
Sbjct: 594 DTSRAMDDAMHSLRDLEGGTTNLTRLIERLK 624