Pairwise Alignments

Query, 273 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 260 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score =  152 bits (385), Expect = 5e-42
 Identities = 93/250 (37%), Positives = 134/250 (53%), Gaps = 1/250 (0%)

Query: 18  GVVAGLLAGLFGIGGGAVLVPVFYHVFGLLDVPEAVRMHLSLGTSLAIIVPTSVRSFLTH 77
           G  AG+LAGLFG+GGG ++VPV    F        +  HL++GTSLA IV TS+ S LTH
Sbjct: 10  GGFAGVLAGLFGVGGGLIIVPVLVFSFSAQGFSADILTHLAVGTSLATIVFTSINSILTH 69

Query: 78  RQKGAVDIDLLKGWIVAVPLGTILASVVAAYASSVALRLIFAFIALALAFRMIVNRASWQ 137
            +KGAV    +      + +G  L S+ AA      L+ I    ALA+A +M  +     
Sbjct: 70  HRKGAVRWPTVLWMTFGILVGAALGSLTAAAIQGPMLQKIIGVFALAMAVQMGFDLRPKA 129

Query: 138 LGSDLPKNPARFLVGTGIGLLSGLMGVGGGVMNNTFMTLYGRTIHQAVATSSGVGVLISL 197
            G   P  P   LVG  IG  S + G+GGG ++  ++T     + QAVATS+  G+ I++
Sbjct: 130 TGR-APGRPELSLVGVVIGWASAIFGIGGGSLSVPYLTWRSVPMQQAVATSAACGLPIAI 188

Query: 198 PGLLGYIWAGWGNAGLPPFSTGFINWIAVVLLIPITLLVAPYGVRLAHALSKKQLERAFG 257
            G L ++  GW    LP +S GF+   A++ +   ++  A  G +LAH LS K L+R F 
Sbjct: 189 AGALSFMVVGWHETQLPDWSLGFVYLPAMLGIAATSMFFARLGAKLAHRLSAKVLKRLFA 248

Query: 258 VFLVFVAAQF 267
           + L+ V   F
Sbjct: 249 LLLLSVGINF 258



 Score = 36.2 bits (82), Expect = 7e-07
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 20/130 (15%)

Query: 150 LVGTGIGLLSGLMGVGGGVMNNTFMTL------YGRTI--HQAVATSSGVGVLISLPGLL 201
           L+G   G+L+GL GVGGG++    +        +   I  H AV TS    V  S+  +L
Sbjct: 8   LLGGFAGVLAGLFGVGGGLIIVPVLVFSFSAQGFSADILTHLAVGTSLATIVFTSINSIL 67

Query: 202 GYIWAGWGNAGLPPFSTGFINWIAVVLLIPITLLVAPYGVRLAHALSKKQLERAFGVFLV 261
            +               G + W  V+ +    L+ A  G   A A+    L++  GVF +
Sbjct: 68  TH------------HRKGAVRWPTVLWMTFGILVGAALGSLTAAAIQGPMLQKIIGVFAL 115

Query: 262 FVAAQFFYSV 271
            +A Q  + +
Sbjct: 116 AMAVQMGFDL 125