Pairwise Alignments

Query, 308 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 308 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  136 bits (342), Expect = 7e-37
 Identities = 92/308 (29%), Positives = 160/308 (51%), Gaps = 16/308 (5%)

Query: 5   VSIRNLTKSYANGFQALKGVSLDIKEGEILALLGPNGAGKTTLISIVCGLVNPGEGSVLV 64
           +   N+ K + + F A++ ++L ++ G I   LGPNG GK+T I ++ GL+ P  G + V
Sbjct: 6   IHAENVVKQFGH-FTAIENINLKVERGSIYGFLGPNGCGKSTTIRVLTGLLQPTAGQIKV 64

Query: 65  GGHNVVKDFRQTRALIGLVPQELTTDMFETVWNTVSFSRGLHGQKKNPAL--IESILKSL 122
            G ++ K     R  IG + Q+ +     TV   + F   + G  ++      ++ LK+ 
Sbjct: 65  LGLSIPKQSELLRLKIGYMTQKFSLYDDLTVQENLQFIGQIFGMNRSTLQQRTQAQLKTY 124

Query: 123 SLWDKKDNMLRELSGGMKRRVLIAKALAHEPKVLFLDEPTAGVDVTLRRDMWNVVSELRA 182
            L +++   +  +SGG K+R+ +A A  H P++LFLDE T+ VD   RR+ W  + +L A
Sbjct: 125 GLDERRKQRVSGMSGGQKQRLALAAATMHNPELLFLDEHTSAVDPENRREFWEQLFDLSA 184

Query: 183 KGVTIILTTHYIEEAEEIADRVGVINGGELLLVEEKTALMKKLGRKQLFLELTQPVERLP 242
           +G TI++TTHY++EAE    R+ ++  GE+   +E   LM+++G     +E+  P  R  
Sbjct: 185 QGTTILVTTHYMDEAER-CHRLAIMEAGEIRADDEPEKLMQQMGVN--VVEIKAPALR-- 239

Query: 243 DSLAPFALTLSDDRSTITYEIEGNGEQGRIADLLGAL-----SAANIHFKDISTRQSSLE 297
            SL    L  S  RS     I       R  D++  +     +   +   +++  + SLE
Sbjct: 240 -SLKEKLLNFSQVRSAAQLGIRLRVLVHR--DVIDPILWLRHTFPQLAAAELTLARPSLE 296

Query: 298 DIFVSLVG 305
           D+FV++ G
Sbjct: 297 DVFVTVTG 304