Pairwise Alignments

Query, 311 a.a., transcriptional regulator from Agrobacterium fabrum C58

Subject, 331 a.a., DNA-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (302), Expect = 3e-32
 Identities = 80/299 (26%), Positives = 149/299 (49%), Gaps = 4/299 (1%)

Query: 1   MISRVAQMYFSEHKRQAEIAQHLNLSQATVSRMLKRAEAEGIVRTSIIPPPGTYSDLEAQ 60
           +++ +A  Y+ +   Q EI++   +S+A V R+LK+A  EGIV  ++   P   + +E +
Sbjct: 14  LLTEIAVSYYQDGATQEEISKKYTISRAKVGRLLKQARDEGIVEITVKYHPVFSAKIEQR 73

Query: 61  LRERFDLPEAIVVDCSEDRDGAIMARIGEAAAHFLEVTLSQNEIIGVSSWSQTIFKMVEN 120
           L ERF +  A++    +  D A   ++    +++L  TL    ++ V    + +  +  +
Sbjct: 74  LIERFGVRRALIA-LDQPNDEAQRQQVAGLVSNYLTSTLKNGMVVTVGQ-GRNVSAVAHH 131

Query: 121 IHPLKGAKARYIVQTLGGMGDPSVQTHATQITTRLARLTEAEPKLLPVPGVATSREAKLL 180
           +  +     +++  ++GG+       +A  I  +LA+      + L  P  A + E K +
Sbjct: 132 VGVITPRDCKFVC-SIGGIHPRGGMFNADHICRQLAKKYGGSSETLYAPAYAENPEQKRV 190

Query: 181 MLADPFVRETIDLFGSITLAIVGVGAVEPSELLARSGNIFSTKELADLAQAGAVGDISLR 240
            + +  V++T+DL     +A+VG+G +  +  +   G     + +      G VGD +  
Sbjct: 191 FMQNSTVKQTLDLARKADIALVGIGDMSENSYMVDLGWFTPEEVVQSRLNQGVVGDFAGH 250

Query: 241 -FFDKDGKPVKTPLDDRVIGLPLENLSNVDRVIALAGGLKKTEAIAGALRTGVIDVLVT 298
            FFD  G+   T ++DRVIGL ++    +  VIA+A    K  A+ GALRTG IDV+ T
Sbjct: 251 DFFDVHGRIANTVMNDRVIGLGIDEFRPIAEVIAIAAENSKPLALLGALRTGAIDVIAT 309