Pairwise Alignments

Query, 326 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  243 bits (619), Expect = 6e-69
 Identities = 149/296 (50%), Positives = 187/296 (63%), Gaps = 10/296 (3%)

Query: 27  LLGLLMLCVFLTFASENFLSLRNGLNILDQITVLGIMAVGMTFVILLGGIDLSVGSVLAL 86
           L+ LL L V ++F + NF ++ N LNIL Q +V  I+AVGMT VIL  GIDLSVGSVLAL
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLAL 94

Query: 87  SMMIMGWTANVAGMPMGMAIVLALVASAACGLVVGILVTAFRVPAFIATLAMMSVARGLA 146
                  T     +P+ +A+  AL+A AA G + GI++   +V AFIATL  M++ RG+ 
Sbjct: 95  CGAFAA-TLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVT 153

Query: 147 NMITDGQQI-VGFPDWFMMLAIERHFGV-----LTATVLLMLVVVLVSWAFLRFRSEGRT 200
            + TDG+ I  GF D     A    FG      +   V LM+VV   +W  L     GR 
Sbjct: 154 MVYTDGRPISTGFTDTADTFA---WFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRY 210

Query: 201 VYAVGGNPEVARLAGINVPLVTICVYVVCAVLAGLAGIVLAARLDSVQPSSGFGYELDTI 260
           VYAVGGN    RL+GINV  V I VY +C +LA LAGI++ +RL S QP++G GYELD I
Sbjct: 211 VYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAI 270

Query: 261 AAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQVIIGVVIVLAV 316
           AAVV+GGTSL GG G I GTLIG LIIG L N LNLL+VS + Q +   VVI+LAV
Sbjct: 271 AAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAV 326