Pairwise Alignments

Query, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

Subject, 296 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  137 bits (346), Expect = 2e-37
 Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 5/290 (1%)

Query: 1   MKFSRILLTSAALLALSLGSANAAEVKKIGLAVANLQANFFNQIKQAVEAEAKTRGIAVV 60
           M   RIL T  A  AL+L  A+ A    IG ++   Q  F+ ++ +A++AEAK + +A+ 
Sbjct: 1   MNMPRILKTLVAGTALTL-LASGAFADGIGASLLTQQHPFYIELAEAMKAEAKEKNVALE 59

Query: 61  TVDAKGDGPTQVNQIQDLLTQNIDALIYIPAGAAAATVPVKLAKAAGVPVINIDRNADGA 120
              A  D   Q+  ++D + + +D ++  P  +      +  A+ AG+ VI +D  A+GA
Sbjct: 60  VAIANQDLNKQLADVEDFIVKGVDVIVISPVDSQGVRAAIAKAEKAGIKVITVDVPANGA 119

Query: 121 PGDTFLATDSVASAKSVCDYIIKQAGGAGKMVIIHGQKGTTPEVDRTKGCMESVKANSGV 180
              + + TD+        + + +  G  GK+ II         V+R  G  E++  +  +
Sbjct: 120 TVTSHIGTDNFTGGVKAGELMAEVLGNKGKVAII-DYPTVQSVVNRVNGFKEAIAKHPEM 178

Query: 181 KIVAEQWSNMWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQKIVVG 240
           +IVA Q     ++ E     QNMLQANPD++ +F   D  AL AA A+K A    ++ V 
Sbjct: 179 EIVATQTG--ITRAEALAAAQNMLQANPDITGIFGFGDDAALAAAVAVKAAGLESQVKVI 236

Query: 241 GFDGDTAALEALKNGVFDVTATQQ-TQKMGRMAVEMAVKIVGGEKVPAVQ 289
           GFDG   A +A+      V   QQ   +MG+ A++ AVK+V GE VPA Q
Sbjct: 237 GFDGMKEARDAVDGNPVMVGVIQQFPDQMGKQAIDTAVKVVAGETVPAEQ 286