Pairwise Alignments

Query, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

Subject, 327 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  143 bits (360), Expect = 6e-39
 Identities = 95/315 (30%), Positives = 164/315 (52%), Gaps = 19/315 (6%)

Query: 9   TSAALLALSLGSANAAEVKKIG------LAVANLQANFFNQIKQ--AVEAEAKTRGIAVV 60
           T+A  +A++ G+   AE+ K+       +  A  ++N   +I Q  +++AEA+  G  +V
Sbjct: 14  TAAGAIAIA-GTVAFAELPKLAQKETYKVGFAQTESNNPWRIAQTNSMKAEAEKLGHQLV 72

Query: 61  TVDAKGDGPTQVNQIQDLLTQNIDALIYIPAGAAAATVPVKLAKAAGVPVINIDRNAD-- 118
             DA G    QV  +  ++ Q +D +   P         V  AK AG+PVI +DR+ D  
Sbjct: 73  YTDAAGSAAKQVADVNSMIAQGVDLIFLAPREEKPLIPAVMAAKKAGIPVILLDRSVDPS 132

Query: 119 ----GAPGDTFLATDSVASAKSVCDYIIKQAGGAGKMVIIHGQKGTTPEVDRTKGCMESV 174
               G    TF+ +D +   K + ++++K A G  K++ + G  G++P  DR KG  E++
Sbjct: 133 LAKAGEDYVTFIGSDFIEEGKRIAEWLVKNANGKSKIIELEGTTGSSPANDRKKGFDETI 192

Query: 175 KANSGVKIVAEQWSNMWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVAN-- 232
           KA  G +IVA Q S  +++D+G Q+ + +LQA+PD  IV+A  D +A+GA  AI+ A   
Sbjct: 193 KAAGGFEIVASQ-SGDFARDKGRQVAEALLQAHPDADIVYAHNDEMAIGAIAAIEAAGKV 251

Query: 233 PSQKIVVGGFDGDTAALEALKNGVFDVTATQQTQKMGRMAVEMAVKIVGGEKVPAVQLSD 292
           P + ++V   DG   A++A+ +G       +   + G  A E  ++   GEK+  + +++
Sbjct: 252 PGKDVLVLSIDGGKEAVQAVIDGKI-AAVVECNPRFGPKAFETMLRYAKGEKIDPMVINE 310

Query: 293 ATLTTKENVAGFIAN 307
                  N A  +AN
Sbjct: 311 DKFYDSSNAAAELAN 325