Pairwise Alignments

Query, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

Subject, 322 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  117 bits (294), Expect = 3e-31
 Identities = 92/316 (29%), Positives = 145/316 (45%), Gaps = 10/316 (3%)

Query: 1   MKFSRILLTSAALLALSLGSANAAEVKK--IGLAVANLQANFFNQIKQAVEAEA-KTRGI 57
           +K + +    AA  AL       A+ KK  IG + A     +  Q  + + AEA K   +
Sbjct: 7   LKLTAVAAVLAATTALMPADDALAQDKKFRIGFSQATTIEPWRAQFNKDIIAEAAKHPDV 66

Query: 58  AVVTVDAKGDGPTQVNQIQDLLTQNIDALIYIPAGAAAATVPVKLAKAAGVPVINIDRNA 117
            ++  D +     QV  +++L+ Q +DAL+  P  +A  T  V+ A  A +PV  +DRN 
Sbjct: 67  ELIITDGEDRTEKQVADVENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRNV 126

Query: 118 DGAPGDTFLATDSVASAKSVCDYIIKQAGGAGK----MVIIHGQKGTTPEVDRTKGCMES 173
           +      F+  D+    ++  +Y ++  GG GK    +V I G  GT P  DR  G  E 
Sbjct: 127 ETDQYTQFVGGDNKLIGRAAGEYAVELLGGKGKAEGNIVEIWGGMGTQPAHDRHDGFHEF 186

Query: 174 VKANSGVKIVAEQWSNMWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANP 233
                G+K + +Q S  W QD+ + IM   L+ N  + +V+   D +A GA  A K A  
Sbjct: 187 TDKEPGIKNLLDQQSGDWKQDQAYNIMATALRNNEKIDLVYGHNDPMAYGAYLAAKDAGR 246

Query: 234 SQKIVVGGFDG-DTAALEALKNGVFDVTATQQTQKMGRMAVEMAVKIVGGEKVPAVQLSD 292
            +++   G D      +  + NG  ++TAT      G   +  AVK + GEKV      D
Sbjct: 247 EKEMKFIGIDALPNEGVTWVNNG--ELTATFLYATPGAEGLRQAVKFLKGEKVEKTVTLD 304

Query: 293 ATLTTKENVAGFIANH 308
               TKEN A  + ++
Sbjct: 305 TMKVTKENAAQILKDN 320