Pairwise Alignments

Query, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

Subject, 309 a.a., rhizopine binding protein from Sinorhizobium meliloti 1021

 Score =  119 bits (299), Expect = 7e-32
 Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 18/308 (5%)

Query: 8   LTSAALLALSLGSANAAEVKKIGLAVANLQANFFNQIKQAVEAEA-KTRGIAVVTVDAKG 66
           L SAA+LAL  GSA+A   + +G+ +A   + F   ++  ++ +A K  G+ V   DA+ 
Sbjct: 4   LLSAAVLALFAGSAHA---ENVGITIARSDSAFLTILRNGMQDQAAKLDGVTVQVEDAQN 60

Query: 67  DGPTQVNQIQDLLTQNIDALIYIPAGAAAATVPVKLAKAAGVPVI-------NIDRNADG 119
           D   Q++Q+Q+ ++  +DA+I +     +     K+A  AG+P++       ++D+  + 
Sbjct: 61  DTSRQLDQVQNFVSSGVDAIIVVAVDGDSTPALTKMATDAGIPIVYANHPPADVDKLPET 120

Query: 120 APGDTFLATDSVASAKSVCDYIIKQAGGAGKMVIIHGQKGTTPEVDRTKGCMESVKAN-- 177
           A    F+ ++ + S       + +  GG G   ++ G       + RTK   + +  +  
Sbjct: 121 A---AFVGSNEIDSGTLETKEVCRLLGGKGAAYVLMGPLNNHSSLTRTKDIHDVIATDEC 177

Query: 178 SGVKIVAEQWSNMWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVAN-PSQK 236
            G+ ++ EQ +N W + E   IM N L    + + + A  D +A+GA QA+K A     K
Sbjct: 178 KGMSVIEEQSAN-WDRLEAANIMTNWLSTGREFNAIIANNDEMAIGAIQAMKAAGVDMSK 236

Query: 237 IVVGGFDGDTAALEALKNGVFDVTATQQTQKMGRMAVEMAVKIVGGEKVPAVQLSDATLT 296
           +VVGG D     L A+  G  DVT  Q     G  A++ AV +   +K          L 
Sbjct: 237 VVVGGIDATPDGLAAMAAGDLDVTVFQNAIAQGAAAMDAAVALSRDQKTARQIWVPFELV 296

Query: 297 TKENVAGF 304
           T EN+  +
Sbjct: 297 TPENMKDY 304