Pairwise Alignments

Query, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

Subject, 330 a.a., D-xylose transporter subunit XylF from Klebsiella michiganensis M5al

 Score =  104 bits (259), Expect = 3e-27
 Identities = 79/299 (26%), Positives = 143/299 (47%), Gaps = 15/299 (5%)

Query: 1   MKFSRILLTSAALLALSLGSANAAEVKKIGLAVANLQANFFNQIKQAVEAEAKTRGIAVV 60
           MK   + LT  A L L+  S  A EVK IG+A+ +L+   + + +     +A++ G  V 
Sbjct: 1   MKIKNLCLTLCASLLLTSLSGIAKEVK-IGMAIDDLRLERWQKDRDIFVNKAESLGAKVF 59

Query: 61  TVDAKGDGPTQVNQIQDLLTQNIDALIYIPAGAAAATVPVKLAKAAGVPVINIDRNADGA 120
              A G+  TQ++QI++++ + +D L+ IP      +  +K AK  G+ V+  DR  + A
Sbjct: 60  VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVIKEAKQEGIKVLAYDRLINNA 119

Query: 121 PGDTFLATDSVASAKSVCDYIIKQAGGAGKMVIIHGQKGTTPEVDRTK----GCMESVKA 176
             D +++ ++    +     ++ +       ++     G +P  +  K    G M+ +K 
Sbjct: 120 DIDFYISFNNEKVGEMQAQSLVDKVPQGNYFLM-----GGSPVDNNAKLFRAGQMKVLKP 174

Query: 177 ---NSGVKIVAEQWSNMWSQDEGFQIMQNMLQANPD-VSIVFAQADGLALGAAQAIKVAN 232
                 +KIV +QW + W  +   +IM+N L AN + +  V A  D  A GA QA+    
Sbjct: 175 YVDEGKIKIVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234

Query: 233 PSQKIVVGGFDGDTAALEALKNGVFDVTATQQTQKMGRMAVEMAVKIVGGEKVPAVQLS 291
            + K+ + G D D A ++ +  G   +T  +    +   A E+AV++ G +K P    S
Sbjct: 235 LAGKVAISGQDADLAGVKRIIAGTQTMTVYKPITTLATTAAEIAVEL-GNDKQPQADSS 292