Pairwise Alignments

Query, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

Subject, 314 a.a., D-ribose ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

 Score =  171 bits (433), Expect = 2e-47
 Identities = 97/286 (33%), Positives = 158/286 (55%), Gaps = 2/286 (0%)

Query: 19  GSANAAEVKKIGLAVANLQANFFNQIKQAVEAEAKTRGIAVVTVDAKGDGPTQVNQIQDL 78
           GS +++   K+ L V+ L   FF  ++   +A AK  G+ ++  DA+ D  TQ NQ Q+ 
Sbjct: 30  GSTSSSGGDKVALLVSTLNNPFFVDLRDGAQAAAKDLGVDLMVSDAQNDSSTQQNQAQNA 89

Query: 79  LTQNIDALIYIPAGAAAATVPVKLAKAAGVPVINIDRNADGAPGDTFLATDSVASAKSVC 138
            +Q   A+I  P  + AA+  V    ++ +PVI++DR+  G    + +A+D+VA      
Sbjct: 90  QSQGAKAVIINPVDSDAASPAVAPLLSSSLPVISVDRSVTGEDVTSHIASDNVAGGAQAA 149

Query: 139 DYIIKQAGGAGKMVIIHGQKGTTPEVDRTKGCMESVKANSGVKIVAEQWSNMWSQDEGFQ 198
           D + K  G  GK++I+ G  G     DR  G  + +K  SG+++VAEQ +N + + E   
Sbjct: 150 DELAKAVGEKGKVIILQGTPGAASTRDRGDGFKKEIKKYSGIEVVAEQTAN-FDRAEALD 208

Query: 199 IMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQKIVVGGFDGDTAALEALKNGVFD 258
           +  N++Q+NPDV  ++A+ D +ALGA Q++  +     + + GFDG    L+A+ NG   
Sbjct: 209 VTTNLMQSNPDVVGIYAENDEMALGAIQSLG-SKAGADVKIFGFDGTEDGLKAVSNGTMV 267

Query: 259 VTATQQTQKMGRMAVEMAVKIVGGEKVPAVQLSDATLTTKENVAGF 304
            T  QQ +++G+ AVE AVK + GE V   +  +    TK NVA F
Sbjct: 268 GTIAQQPKELGKKAVEAAVKAIKGESVEKTESIEVKTVTKGNVADF 313