Pairwise Alignments

Query, 363 a.a., RecA protein from Agrobacterium fabrum C58

Subject, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis S2

 Score = 46.6 bits (109), Expect = 9e-10
 Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 33/216 (15%)

Query: 51  VSTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICA-------- 102
           +STGS  LD  L  GG+    + E  G   SGKT +  QT    Q +  I A        
Sbjct: 80  LSTGSTELDTVLA-GGIESQSVTEFAGMFGSGKTQIMHQTCVNLQIREKIFADLEGVVEE 138

Query: 103 --------FVDAEHALDPV----YARKLGVDLQSLL----ISQPDTGEQAL----EITDT 142
                   ++D E    P      A   G+D Q++L    +++    +  +    +I D 
Sbjct: 139 ELEAPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDL 198

Query: 143 LVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKCMVIF 202
           +     + +++IDS+ + T R E  G     L   Q +L  + +  L        C+V+ 
Sbjct: 199 IKGGNNIKLVIIDSLTS-TFRNEFTGR--GKLAERQQKL-GRHMATLNKLADLYNCIVLV 254

Query: 203 INQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRR 238
            NQ+  K    FG  E   GG+ +   A+ R  +R+
Sbjct: 255 TNQVAAKPDAYFGVAEQAIGGHVVGHAATFRFFLRK 290