Pairwise Alignments

Query, 297 a.a., permease from Agrobacterium fabrum C58

Subject, 334 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score = 84.3 bits (207), Expect = 3e-21
 Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 21/282 (7%)

Query: 11  ITVFLWGFNFVAIKVGVADMPPLFLTGVRYLFAAVPLVFFLP-------KPNVPWRHMIV 63
           + V LWGF++  +K+ V   PPL+L  +R+  + + L  FL         P   W  +  
Sbjct: 30  VMVALWGFSWPVMKICVGLAPPLWLAAIRFTSSGLCLFAFLACRGELRLPPRADWPIVAS 89

Query: 64  YG--MAMGFFQFGLLYPAIKLGLPAGLASLVMQSQAFFTLALAVVFLGERPLPSQIAGAI 121
            G    M F   GL+         AG A+L+  +   + +  A +  G+RP  +Q     
Sbjct: 90  VGGLQMMAFTGLGLVAMQYT---DAGRAALLAYTTPLWAVVTAWIAFGQRPTAAQGVALC 146

Query: 122 VAFGGLAVI----GMERMTAAALIPLLMGVGSAIAWACGNI-VNRRIGQVNVVSFIAWTS 176
           V   G+AVI     M+   +  L+   + + SA+ W+   + V R       +    W  
Sbjct: 147 VGLSGVAVICSPADMDWGDSTVLLGNALLLLSAMCWSFVILHVRRHRFTARPIDLAPWQM 206

Query: 177 LVPVLPLVLLSLVVEGPDAIVEGLQNATPTMALVVIYMAYGATIVGAGIWSYLLLRYPAG 236
           L+  LPL++++  V+G    +      TP +   +IY    AT     I S    R  A 
Sbjct: 207 LLAALPLIVIAASVDGSPLTIAW----TPELIGFLIYFGPIATSACFVISSEYGRRVSAF 262

Query: 237 TVAPFSLLVPIVGFISAYLAFAEHITIFEIIGAALVILGLAL 278
            ++  +L VP++G +S+     E +T+  IIG  L++ G+AL
Sbjct: 263 AMSNITLGVPVIGMLSSIFLLGERVTVPLIIGLTLIVSGVAL 304