Pairwise Alignments

Query, 297 a.a., permease from Agrobacterium fabrum C58

Subject, 308 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 18/288 (6%)

Query: 11  ITVFLWGFNFVAIKVGVADMPPLFLTGVRY-----LFAAVPLVFFLPKPNVPWR--HMIV 63
           + V LW   F+  ++ +    PL +  +R+     L   + LV     P  P +  H+ V
Sbjct: 19  VFVLLWSTGFIGARLVLPHAEPLTVLCLRFAATVALLGPLCLVLKARWPTSPHQLLHVAV 78

Query: 64  YGMAMGFFQFGLLYPAIKLGLPAGLASLVMQSQAFFTLALAVVFLGERPLPSQIAGAIVA 123
            G+ +     G ++ AI LG+PAGL +LV+  Q   T ALA   LGE+    Q  G ++ 
Sbjct: 79  AGILVHALYLGGVFAAISLGMPAGLTALVVGIQPLLTAALAGPVLGEKTTARQGLGLVLG 138

Query: 124 FGGLAVIGMERMTAAALIPLLMGVGS-----AIAWACGNIVNRRIGQVNVVSFIAWTSLV 178
             G+A +  +++   A   L  G G+     A+A  CG I    + Q      +  TS  
Sbjct: 139 LAGVAAVLGDKLAPQA-GTLFDGFGAAAMICALAALCG-ITFGTLYQKRFCQGVDLTS-- 194

Query: 179 PVLPLVLLSLVVEGPDAIVEGLQNATPTMALV--VIYMAYGATIVGAGIWSYLLLRYPAG 236
             L   ++S VV  P A          T   +  + ++  G ++    +   ++    AG
Sbjct: 195 GSLIQFIVSGVVLLPFAYTFETMRVDWTAEFIFGLAWLVVGLSVGAVTLLLAMIRHGAAG 254

Query: 237 TVAPFSLLVPIVGFISAYLAFAEHITIFEIIGAALVILGLALNVFGRR 284
            VA    LVP    + A+  F E +    + G A+ + G+AL V  RR
Sbjct: 255 RVASLFYLVPPTTALMAWGLFDERLGPLALAGMAVTVAGVALVVAPRR 302