Pairwise Alignments

Query, 297 a.a., permease from Agrobacterium fabrum C58

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 80.1 bits (196), Expect = 6e-20
 Identities = 65/290 (22%), Positives = 134/290 (46%), Gaps = 9/290 (3%)

Query: 6   IFLALITVFLWGFNFVAIKVGVADMPPLFLTGVRYLFAAVPLVFFLPKPNVPWRHMIVYG 65
           I L  +TV  WG +FV+ K+ +  +PP+ +  +R + AAV L+FF+       +   VY 
Sbjct: 8   ILLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVILIFFIRNFTKYSKEDFVYI 67

Query: 66  MAMGFFQFGLLYPAIKLGL---PAGLASLVMQSQAFFTLALAVVFLGERPLPSQIA--GA 120
           +  GF      Y    + L    A  ASL+  +   F L ++ +   E+ +PS+I   G+
Sbjct: 68  VLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIV--EKKIPSKIKYFGS 125

Query: 121 IVAFGGLAVIGMERMTAAALIPL--LMGVGSAIAWACGNIVNRRIGQVNVVSFIAWTSLV 178
           ++   G+ ++ +       L PL  ++  G+   W     V +++ + + +      +L+
Sbjct: 126 LIGLFGVFILILNGKFVLELNPLGDILMFGAVCTWVLYTFVIQKLQKHDDLKVTRDITLI 185

Query: 179 PVLPLVLLSLVVEGPDAIVEGLQNATPTMALVVIYMAYGATIVGAGIWSYLLLRYPAGTV 238
             +  +  +++  G + + E      P +A  ++Y+A   + +    W+  +    A T 
Sbjct: 186 GAVFFIPFTIMELGYNGMFEFTILLNPYIAFSLLYLAIFCSAIAYLFWNMAIRLAGASTT 245

Query: 239 APFSLLVPIVGFISAYLAFAEHITIFEIIGAALVILGLALNVFGRRIGVS 288
                ++PIV  I+  +       I+ IIGA LV+ G+ ++  G ++ ++
Sbjct: 246 TNGVYIIPIVAMITDAIILKNIPNIYAIIGAVLVLFGVYISENGGKLKIN 295