Pairwise Alignments

Query, 311 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 317 a.a., PP-loop domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  249 bits (637), Expect = 5e-71
 Identities = 124/250 (49%), Positives = 171/250 (68%)

Query: 46  NKLRKRLLRNVRQAFEDFGMLNGQKRWLVGLSGGKDSYGLLALLLDLKWRGLLPVELVAC 105
           NKL+KRL R V  A  D+ M+      +  LSGGKDSY +L +L++L  R  +   LVA 
Sbjct: 15  NKLQKRLRREVGSAIADYNMIEEGDTVMCCLSGGKDSYAMLDILVNLLQRAPVNFNLVAV 74

Query: 106 NLDQGQPNFPKHVLPEYLAKIGVAHRIEYRDTYSIVKEKVPSGGTYCSLCSRLRRGNLYR 165
           NLDQ QP FP+ +LP YL  + V + I  +DTYSIVK+K+P G T CSLCSRLRRG LY 
Sbjct: 75  NLDQKQPGFPEDILPAYLDSLKVPYHILEKDTYSIVKDKIPEGKTTCSLCSRLRRGTLYG 134

Query: 166 IAREEGCDALLLGHHREDILETFFMNFFHGGRLAGMPAKLLNDEGDLMVMRPLAYCAEED 225
            A++ G   + LGHHR+DI+ET F+N F+ G+L  MP KLL+D+G  +V+RPLAY  E+D
Sbjct: 135 FAQKIGATKIALGHHRDDIIETMFLNMFYAGKLKAMPPKLLSDDGANVVIRPLAYSREKD 194

Query: 226 MAKFAAAMEFPIIPCDLCGSQDGLQRNAMKDMLADIERRMPGRKDVMLRALAHVNPSHLL 285
           +A++A    FPIIPC+LCGSQ+ L+R A+K+ML   +++ PGR + +  A+ + +PS  +
Sbjct: 195 IAEYAELKAFPIIPCNLCGSQENLKRAAVKEMLKSWDKQFPGRIETIFTAMQNTSPSQGV 254

Query: 286 DPKLFDFSAL 295
           D   FDF +L
Sbjct: 255 DRDQFDFVSL 264