Pairwise Alignments

Query, 503 a.a., ATP-dependent RNA helicase from Agrobacterium fabrum C58

Subject, 503 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  317 bits (813), Expect = 5e-91
 Identities = 180/424 (42%), Positives = 249/424 (58%), Gaps = 18/424 (4%)

Query: 1   MTTFSDLGLSQKVLSAIADAGYTTPTPIQAGAIPPALEKRDICGIAQTGTGKTASFVLPM 60
           M+TF +LGLS+ +++ ++  G+  PTPIQA AIP  L+  D+ G+AQTGTGKTA+F LPM
Sbjct: 1   MSTFKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPM 60

Query: 61  LTLL--EKGRARARMPRTLILEPTRELAAQVAENFEKYGKNHKLNVALLIGGVSFEDQDR 118
           +  L  +  R   R  R L+L PTREL  Q+A N + + K   L + L++GGVS   Q  
Sbjct: 61  IEKLVADGRRPDPRNIRALVLAPTRELVNQIAANLKLFVKKSPLKIGLVVGGVSINKQTE 120

Query: 119 KLERGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKMIPFT 178
           +L RG D+L+ TPGRLLD   R  + +T    LV+DEAD+MLD+GFI D+ +I+K++P  
Sbjct: 121 QLARGVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKN 180

Query: 179 RQTLFFSATMPPEIQKLADRFLQNPTRIEVAKPSSTAKTVTQRIVAAHNKDYEKRAVLRD 238
           RQTL FSATMP  I +LA  +L +P ++EV+ P   A  V Q +     KD  K  +L+ 
Sbjct: 181 RQTLLFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDL-KTTILKQ 239

Query: 239 LVRAEEAELKNAIIFCNRKKDVADLFRSLDRHGFSVGALHGDMDQRSRTTMLQNFRDGQL 298
            + A    L  ++IF   K     L + LD  GF   ++HG+  Q  R   L+ FRDG++
Sbjct: 240 TLTANPDGL--SLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEI 297

Query: 299 TLLVASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGKAFTLVTKSDAKY 358
            +LVA+DVAARG+DIP V+HV+N+D+P   + YVHRIGRT R GR G A       + + 
Sbjct: 298 RVLVATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRL 357

Query: 359 LDAIEKLIAEKIEWLSGDLSSLPAPMESFESNSGRRGTKERSGRGRDRN----------R 408
           L  IEKL+  +I   SG+    PA         G RG  +  G G+ R           R
Sbjct: 358 LRDIEKLMGIQIAVASGE---APADQARPSKGRGGRGNGQPRGNGQPRGNGAGQRQGGPR 414

Query: 409 RDAP 412
           RD P
Sbjct: 415 RDRP 418