Pairwise Alignments

Query, 307 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 368 a.a., Nucleoside ABC transporter, permease protein 1 from Pseudomonas fluorescens FW300-N2E2

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 27/293 (9%)

Query: 18  PLVIAASGELVAERSGVLNLGVEGMMIMGAVCAFAA------THMTGSPYLGILAGIASG 71
           P+++ A G  VA ++ + N+G EG +++GA+   A            +  L +L G  +G
Sbjct: 69  PILLCALGLAVAYQARIWNIGAEGQLLLGALAGSALAVNIIDVQSRWALVLILLTGTLAG 128

Query: 72  AVFSLLFGFLTLTLVTNQVATGLALTILGLG-----VSGMLGE-SFVGLPGIKLQPIVFP 125
           A ++ L  +L      N++ T + L  + L      V G L + +    P    +  +F 
Sbjct: 129 AAWAGLTAWLRTRFNANEILTSIMLNYIALNLLLFCVHGPLKDPAGFNFP----ESAMFG 184

Query: 126 VLSEIPFIGPLLFRQDLI---FYMSIALVFGISWFLFKSRAGLKIRAIGDNHASAHALGI 182
             S +    PLL     +    Y ++  +  +   L KS  G +I+ +G +  +A   G 
Sbjct: 185 EASRL----PLLLEDGRVHAGLYFALLALVAVWVLLQKSFVGFQIKVLGLDARAAGFAGF 240

Query: 183 NVIRTRYLAVMFGGACAGLAGAQLSLVYTPQWVENMSAGRGWIALALVVFASWRPWRLLA 242
                 +LA++  GA AGLAG         Q V  +S G G+ A+ +       P  +L 
Sbjct: 241 RQKPLVWLALLISGALAGLAGVCEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGILF 300

Query: 243 GGYLFGAVTIGQLHAQAFGIGVP---SQLLSALPYLATIVVLVIISHNRRTTL 292
              L   + IG   AQ   + +P   +QL   +     +   V+I +  R  L
Sbjct: 301 SSLLMALLYIGGESAQ-MSLNLPQAITQLFQGMMLFFLLACDVLILYRPRLNL 352