Pairwise Alignments

Query, 307 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 365 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 83.2 bits (204), Expect = 9e-21
 Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 32/285 (11%)

Query: 12  VITAATPLVIAASGELVAERSGVLNLGVEGMMIMGAVCAFAA----THMTGSPY--LGIL 65
           ++  ATPL++   G  VA R  + N+G EG    GA+ A AA      +T   Y  L ++
Sbjct: 77  ILLKATPLILIGVGLCVAFRCSIWNIGAEGQFYAGAIAATAAGVSFDGLTAWIYVPLVMI 136

Query: 66  AGIASGAVFSLLFGFLTLTLVTNQVATGLALTILGLG-----VSGMLGESFVGLPGIK-- 118
           AG  +GA ++ + G L +    +++ T + L  + +      V+G L ++    P     
Sbjct: 137 AGALAGAAWAAIAGLLKVYFRASEIVTTIMLNYIAIIMTSYLVTGPLRDAAAAYPQSARL 196

Query: 119 LQPIVFPVLSEIPFIGPLLFRQDLIFYMSIALVFGISWFLFKSRAGLKIRAIGDNHASAH 178
           +Q    P +     + P      ++  +++A+V  I  FLF+S  G  +R +G +  +A 
Sbjct: 197 VQEAWMPRI-----LPPTRLHIGILVALALAVVMYI--FLFRSTRGYALRVVGISPDAAR 249

Query: 179 ALGINVIRTRYLAVMFGGACAGLAGAQLSLVYTPQWVENMSAGRGWIALALVVFASWRPW 238
             GI+V R   L++   G+ AGLAGA      T +  +++S G G+  +A+ + A+  P 
Sbjct: 250 YAGISVPRNIMLSICLSGSMAGLAGAFEIAGVTRRLFQSISPGYGFEGIAVALLANNNPI 309

Query: 239 RLLAGGYLFGAVTIGQLHAQAFGIGVPSQLLSALPYLATIVVLVI 283
             +  G LF  +  G            S+L+     +  ++VLVI
Sbjct: 310 GAVFSGLLFAILRSG------------SELMQITAQVPQVLVLVI 342