Pairwise Alignments

Query, 307 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 310 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  200 bits (509), Expect = 3e-56
 Identities = 113/306 (36%), Positives = 179/306 (58%), Gaps = 9/306 (2%)

Query: 2   MDMLQAILLTVITAATPLVIAASGELVAERSGVLNLGVEGMMIMGAVCAFAATHMTGSPY 61
           +  L A +      A PL+ A+ GE+ +ER+GVLN+G+EG+M+ GA   FAA   +GS  
Sbjct: 7   LSFLAATIAASWRLAAPLMFASIGEVFSERAGVLNIGLEGVMLAGAFAGFAAAFTSGSIL 66

Query: 62  LGILAGIASGAVFSLLFGFLTLTLVTNQVATGLALTILGLGVSGMLGESFVGLPGIKLQ- 120
           LG+ A +A+G +  LLF F T+T+  +Q+  G A+ +LGLG++  L  ++    G  ++ 
Sbjct: 67  LGVAAAVAAGVLVGLLFAFFTITIKADQIVVGAAINLLGLGLTAFLFRAYFSSAGKGIEI 126

Query: 121 --PIVFPVLSEIPFIGPLLFRQDLIFYMSIALVFGISWFLFKSRAGLKIRAIGDNHASAH 178
             P+  P LS++PF G   FRQ+   Y ++ +     + L+++  GL +RA+G++  +  
Sbjct: 127 AKPVDLPWLSDLPFFGEAFFRQNAFVYSTLPVAALAVFVLYRTSFGLTLRAVGEHPKAVD 186

Query: 179 ALGINVIRTRYLAVMFGGACAGLAGAQLSLVYTPQWVENMSAGRGWIALALVVFASWRPW 238
             G +V   RY AV+   A A L GA L+L ++ Q+VE +S+GRG+IALA+VVFA W P 
Sbjct: 187 VSGRSVALYRYGAVLICSALAALGGAFLTLAHSNQFVEGISSGRGFIALAVVVFARWSPI 246

Query: 239 RLLAGGYLFGAVTIGQLHAQAFGI-GVPSQLLSALPYLATIVVLVIISHNRRTTLINTPA 297
                  LFG     QL  QA  +  +P QL  ALPY+ TI  L+++ +      ++TP+
Sbjct: 247 GAFIVSLLFGVFYALQLQLQAQPVLFLPYQLFQALPYVMTIAALILVRNR-----VDTPS 301

Query: 298 SLGKSF 303
            LG ++
Sbjct: 302 MLGVAY 307