Pairwise Alignments

Query, 701 a.a., ATP-dependent DNA helicase from Agrobacterium fabrum C58

Subject, 692 a.a., DNA helicase RecG from Vibrio cholerae E7946 ATCC 55056

 Score =  466 bits (1199), Expect = e-135
 Identities = 286/674 (42%), Positives = 391/674 (58%), Gaps = 29/674 (4%)

Query: 16  LAGVGPKLADLLAKLLSRESADDTRVIDLLFHAPSNVIDRRNRPGIALAAPGAIVTIQGR 75
           L+GVG K+A+ L K+          V DLLFH P    DR     I     G    +QG+
Sbjct: 13  LSGVGAKVAEKLEKVGLHT------VQDLLFHLPLRYEDRTRVYPIVQLHHGLWAAVQGK 66

Query: 76  VDRHQPPPAGNRSAPYRVFLHDETGELALTFFRAKGDWLSKALPVDEEVLVSGKVDWFNG 135
           V          +     V + D  G L L FF      +       + V   G++   N 
Sbjct: 67  V--MAVDTLFGKRKMLTVKISDGNGTLTLRFFNFTAA-MKNNFAEGKFVHAYGEIKRGNQ 123

Query: 136 RASMVHPD--FMVKLSEAENLPLVEAVYPMTAGLSPKVLRRAIEGGLSKLP--VFPEWID 191
              ++HPD  F       +  P +  VYP T GL    LR   +  L  L      E + 
Sbjct: 124 GLEIIHPDYKFFTPAQTPDVEPNLTPVYPTTEGLRQLTLRNLTDQALVLLEKSAVQELLP 183

Query: 192 ETLKTRQGFGDVASSFRELHDPRDSADIDPQA------PARRRLAYDEFLAGQLSLALVR 245
             L  +Q    +A + + +H P  SADID +       PA+ RL  +E LA  LS+  +R
Sbjct: 184 SGLYDQQM--TLAQALKIIHRP--SADIDLRLFEQGRHPAQIRLIMEELLAQNLSMLAIR 239

Query: 246 QRLRKVAGQPIRARGDIAAKILSQLPFSLTASQSAAVKDILTDMAGEDRMLRLLQGDVGA 305
            + ++    P+     +  ++L+QLPFS T +Q   V +I  D+A    M+RL+QGDVG+
Sbjct: 240 SQGQQDVALPLAPVHQLKQQLLAQLPFSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGS 299

Query: 306 GKTLVALMAMATAVEAGGQAVLMAPTEILARQHFATISKLAKAVGLTVEVLTGRTKGKER 365
           GKTLVA +A   A+E G Q  LMAPTE+LA QH    ++  + +G+ V  L G+ KGK R
Sbjct: 300 GKTLVAALAAVRAIEHGYQVALMAPTELLAEQHALNFAQWLEPMGIQVGWLAGKLKGKAR 359

Query: 366 REIEERVASGEAQIVIGTHALFQDSVSYKNLVLAVVDEQHRFGVHQRLRLTAKGIT---- 421
                R+ASGE ++V+GTHALFQ+ VS+ +L L ++DEQHRFGVHQRL L  KG      
Sbjct: 360 ETELARIASGEVKMVVGTHALFQEQVSFDHLALVIIDEQHRFGVHQRLELREKGAKQGAY 419

Query: 422 PHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTVTIPTERIGDIVERLR-AAL 480
           PH L+MTATPIPRTL + A+ D++ S + E P GR PIQTV IP  +  +IVER+R A L
Sbjct: 420 PHQLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDEIVERIRHACL 479

Query: 481 KDGKKAYWICPLVEETEESDLMSAEERHAVLSQMLG-ANIGLIHGRMNGPEKDAAMLAFK 539
            +GK+AYW+C L++E+E  +  +A E    L + L    IGL+HGRM   EK A M AFK
Sbjct: 480 NEGKQAYWVCTLIDESEVLEAQAAAETAEELQRKLPEVKIGLVHGRMKPAEKQAVMQAFK 539

Query: 540 SGETRLLVATTVVEVGVDVPDATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKG 599
           + E  LLVATTV+EVGVDVP+A++M+IE+ ER GLAQLHQLRGRVGRG  AS C+LL+  
Sbjct: 540 NNELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGTVASHCVLLFHA 599

Query: 600 PLSENGRARLSILRDSEDGFLIAEEDLKLRGEGELLGTRQSGTPGFRIASLEAHADLLEI 659
           PLS+  + RL +LR+S DGF+IA+ DL++RG GELLGT+Q+G   F+IA L     L+  
Sbjct: 600 PLSKTAQKRLGVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIADLVRDQQLVPQ 659

Query: 660 ARKDAAYVIERDPE 673
            ++ A ++ ER P+
Sbjct: 660 VQRIARHIHERYPQ 673