Pairwise Alignments

Query, 615 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 2e-17
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 18/183 (9%)

Query: 70  SLNPFVLKGMRTTARGVWDPEFGNLLYESLMLRSSDEPFSLYGLLAETVEWDDERSFIQF 129
           + NP++   +RTT          + +YE L++ +  +  +    LAE+ +  D+   + F
Sbjct: 44  NFNPYLATNLRTTT---------DFIYEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTF 94

Query: 130 NINPRAKWSDGKPVTPDDVIFTFSLLKEKGRPPFNSRLDGVAKMEKVGDRGVRFTFNDKA 189
           +I    KWSDG+  T DDV+++F LLK K           V  +EKV +  VRF  ++ A
Sbjct: 95  DIRKGVKWSDGEAFTADDVVYSFGLLKAKPELDQRGINKWVTSVEKVDEYKVRFRLSE-A 153

Query: 190 NRETPLILASSTPILPKH----AIDPEKFEQAGLGPVVGSGPYRIKTLRPGERIIWERNP 245
           N   P  + S  PI+ +H      DP  F        VG+GP+ +      +  I  RNP
Sbjct: 154 NSNVPYEI-SLIPIVAEHVWKDVKDPTTFTNEN---PVGTGPFTVIDTFTPQLYIQCRNP 209

Query: 246 DYW 248
           +YW
Sbjct: 210 NYW 212