Pairwise Alignments

Query, 615 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 107/495 (21%), Positives = 192/495 (38%), Gaps = 90/495 (18%)

Query: 114 LAETVEWDDERSFIQFNINPRAKWSDGKPVTPDDVIFTFSLLKEKGRPPFNSRLDGVAKM 173
           LAE+ +  D  + ++F +    K+  G   T DDV++TF+ LKE     F    + +  +
Sbjct: 71  LAESWQRVDNET-MRFTLRKGVKFHSGNDFTADDVVWTFNRLKESA--DFKGIFEPLVSL 127

Query: 174 EKVGDRGVRFTFNDKANRETPLILASSTPILPKH--------AIDPEKFEQAGLGP---- 221
            KV D    +T   K     PLI   +T I P          A    K E    G     
Sbjct: 128 TKVDD----YTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSFAS 183

Query: 222 --VVGSGPYRIKTLRPGERIIWERNPDYWGKDIPGKVGFDNYDEISVTYFLQVTTMFEAF 279
             + G+GP+ +     G ++ ++RNP+YW K   G     N D++++    +  T   A 
Sbjct: 184 ENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKG-----NVDKLTLAVIKEDATRVAAL 238

Query: 280 KKGDIDIYPEGDAINGTSDTSHWGQAYNFPAVHRGDIVKDVF-QPRLPTGMFGLVFNTRR 338
             G +D+     A    +D      A             D+F  P      F +  N+  
Sbjct: 239 LSGGVDMI----APVSPNDYQRIKDAKGV----------DLFTMPGTRVITFQMNQNSNP 284

Query: 339 ATFADEKVREGLSYALDFEWLNRNILGGSFKRTQSYWQNSPLGAYGNAADERELALLGDA 398
           A   D +VR+ + YA++ E +   ++ G+     +  Q SP+G  G   + +        
Sbjct: 285 A-LKDVRVRQAIVYAINNEGIVDKVMKGA---ATTAAQQSPVGYAGYNENLK-------- 332

Query: 399 AKTMPAELLAGTYAMPTTDGTGADRKVLKLAVDKLKEAGYSIK-NGKMSDANGRQLAFEI 457
                          P  D        L  A + +KEAGY    N  M   N R +    
Sbjct: 333 ---------------PRFD--------LNKAKELMKEAGYEKGFNLTMIAPNNRYV---- 365

Query: 458 MTQNPAQERIALAYQRSLNLIGVAMGIRSVDDGQYQARSNSFDYDMIIRSLPSSLSPGME 517
                  E+IA A    L+ IG+ + ++++   QY    +    DM++       +    
Sbjct: 366 -----NDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHPD-TEDSA 419

Query: 518 QLNRWNSLSRDA---QGSFNYAGVANPDIDRMIEALLQARSTEDFQAAVRAYDRLLVAGH 574
               + +++RD+   +G +N    +N ++D+++ A  +    E     ++  + +L    
Sbjct: 420 NFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYNEA 479

Query: 575 YIIPLYYIGAQWVAR 589
             +PL++    W A+
Sbjct: 480 AFVPLHFQDPSWAAK 494