Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 311 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas fluorescens FW300-N2E2

 Score =  131 bits (329), Expect = 3e-35
 Identities = 91/314 (28%), Positives = 149/314 (47%), Gaps = 10/314 (3%)

Query: 15  LIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQK--VMSSSGICLEVDTCLADE 72
           L P F +L  A  +E   IANR L  A   ++L +L  ++  + +S+G+ ++ D  +  +
Sbjct: 3   LFPDFLLLDMAGPLEVFSIANRYLA-ADQRYQLLTLGTERGPLRASNGVSVQADIHI--D 59

Query: 73  RRYVSGENRPEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCTAAHILAQAGLLN 132
           + + +      + ++  G       +  ++ WLR A  R    GS+CT A +L +AGLL+
Sbjct: 60  QAWAAYH----VLLVPGGPGAYNDQHPGLHTWLRAAAQRATRYGSICTGAFVLGEAGLLD 115

Query: 133 GKRCAIHWENLPGFSEAFPQVEVYAD-LFEVDSNIYTCAGGTASLDMMLSLIGQDFGENL 191
           G R   HW       + FP+  V  D +F  D  + T  G TA +D+ LS++ QD G  +
Sbjct: 116 GYRVTTHWHYTERLIQRFPKSLVETDKIFLQDRRLITSGGVTAGIDLALSIVAQDHGRKV 175

Query: 192 VNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEPLSLLDIADAAD 251
              V +  L    R     Q  P  A +  Q S +  +   +  +L EP ++  +A  A 
Sbjct: 176 ALDVAKVLLVVMKRQGGQAQFSPSVAAVSTQESAITRVQNHVMEHLEEPFTIERMAALAA 235

Query: 252 LSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACGFVSASHFSKCY 311
           +S R   R+F +E+  +P  +    R+DRAR LL  + +P+  VA   GF S  H    +
Sbjct: 236 MSARHFARVFAREVKMTPMEFLQGARIDRARQLLETTDLPLKTVAFRSGFGSVRHMRFLF 295

Query: 312 REIYNRTPQQERAE 325
            E    TP Q R +
Sbjct: 296 GEKLGLTPVQYRQQ 309