Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 363 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  150 bits (379), Expect = 5e-41
 Identities = 94/327 (28%), Positives = 158/327 (48%), Gaps = 23/327 (7%)

Query: 15  LIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSGICL------EVDTC 68
           ++ +   L FAAAV+ +R ANR+ G  A++W   +   +  M +SG+ +       + +C
Sbjct: 21  VLDESNTLSFAAAVDPMRAANRLAGRGAFDWDYVTATSEPAMLTSGLSVPGIPLARLQSC 80

Query: 69  LADERRYVSGENRPEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCTAAHILAQA 128
                         E+ I+ +G  + +H   S+ A LR     G  I  +     ++A+A
Sbjct: 81  --------------ELLIVIAGFQLARHATPSLLAGLRRLAAGGTTIAGIDGGPWLMAEA 126

Query: 129 GLLNGKRCAIHWENLPGFSEAFPQVEVYADLFEVDSNIYTCAGGTASLDMMLSLIGQDFG 188
           GLL+G     HWE+L  F+  FP V+   D F +     T  G T +++MML +IG   G
Sbjct: 127 GLLDGHPATTHWEDLDNFASRFPGVQCRNDRFTLSEGRMTSGGATPAIEMMLHIIGSRHG 186

Query: 189 ENLVNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEPLSLLDIAD 248
               +RV    L D    P   +R   R      +S       LME  L +P  L +IA+
Sbjct: 187 AGFASRVAGLFLYD---GPGSTERPQSRLGSSKHSSLTARANALMEAALDDPKPLREIAE 243

Query: 249 AADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACGFVSASHFS 308
               S R +++ FR  +  +P  +YL++RL  AR L+  + +P++EVA+A GF S S F+
Sbjct: 244 ELGTSTRSLQQQFRLRLNTTPQDHYLQLRLAEARRLVTDTDLPIMEVALATGFNSQSSFA 303

Query: 309 KCYREIYNRTPQQERAERKLLISASRM 335
           + +R  ++ T ++ R       + +R+
Sbjct: 304 RAFRTAHDITARELRQSSLASAATTRL 330