Pairwise Alignments

Query, 1272 a.a., ribonucleoside-diphosphate reductase 2 alpha chain from Agrobacterium fabrum C58

Subject, 786 a.a., Ribonucleotide reductase large subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (267), Expect = 4e-27
 Identities = 100/368 (27%), Positives = 151/368 (41%), Gaps = 67/368 (18%)

Query: 385 DSEAYLTVSGQ-----NSNNSVSLKDDFLRAVENDGNWNL--------------TARKDG 425
           D  A++T   Q     N N SV + D F+RAV+ D  W+L                 ++G
Sbjct: 172 DLPAFITAKAQAGRLTNFNVSVLVTDAFMRAVDEDATWDLGFSVPPADPARLVAVTERNG 231

Query: 426 K---VMKTLKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEYMFL 482
           +   V + L AR LWEKI    +  A+PG+ F   +N+ +       I  +NPC E    
Sbjct: 232 EPWYVYERLSARALWEKIIRTTYDHAEPGVIFIDRVNERNNLAYCETISCTNPCGEQPLP 291

Query: 483 DDTACNLASLNL-LQFKDAKTK--RIDIADYEHAVRLWTVVLEVSVMMAQFPSRQIAERS 539
            +  CNL  +NL +  +D  T   R D A       +    L+  + ++ FP    A+ +
Sbjct: 292 PNGDCNLGCVNLAVLVRDPFTPQARFDDARLAEVAAIGVRFLDNVLDVSNFPVEDQAKEA 351

Query: 540 YEYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEMAGELGPFPS 599
              R LGLG   +G  L   G+ Y S    A    + A++   +Y  SAE+AGE GPFP 
Sbjct: 352 QAKRRLGLGIMGLGNALQMLGLRYGSPAAIAETRRIMALLRDAAYRASAELAGERGPFPL 411

Query: 600 FAPNRDNMLRVIRNHRRAAHGQSEGYEGLSVNPVALIHADCTDQDLVAHATAAWDKALEL 659
           +  +RD +L                       P      D              D   ++
Sbjct: 412 Y--DRDQLL---------------------ARPFIQELPD--------------DLRAKI 434

Query: 660 GEKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKL----AGGGYFKIINRAV 715
            E+ G RN     IAPTGT  +  +  ++G+EP F    F+K+     G   F +I+   
Sbjct: 435 AEQ-GLRNGVMLTIAPTGTTAIYYNNVSSGLEPTFGWRYFRKVLRPDGGHDEFAVIDAGF 493

Query: 716 PESLRSLG 723
               R+ G
Sbjct: 494 ESWCRTRG 501



 Score = 64.3 bits (155), Expect = 4e-14
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 8/116 (6%)

Query: 199 CFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRGEGEKL-SGGGKSSGLMSF 257
           CF+  +  D ++  GIM+   R A   + G G G++FS LR  G K+   G  SSG +SF
Sbjct: 84  CFVNMIVPDRMD--GIMEALTRAALTMQQGGGIGTDFSTLRPRGAKVRRTGSVSSGPLSF 141

Query: 258 LKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVNEEQ----KVAALVT 309
           ++I     G I SGG  RR A M  +  DHPD+ A+I  K    +     V+ LVT
Sbjct: 142 MEIWHAMCGTIMSGG-ARRGAMMGTMICDHPDLPAFITAKAQAGRLTNFNVSVLVT 196



 Score = 54.3 bits (129), Expect = 4e-11
 Identities = 26/55 (47%), Positives = 34/55 (61%)

Query: 860 LSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCGAAYMLSWKLALKANALYR 914
           LSVE H+RM AA Q FI  +ISKTIN P D + +   A Y L++++  K    YR
Sbjct: 522 LSVEDHLRMQAACQEFIDASISKTINCPADMSYDSFAAVYKLAYEMGCKGCTTYR 576



 Score = 26.9 bits (58), Expect = 0.007
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 1242 GNMCSECQNFTMVRNGTCEKCDTCGATSGCS 1272
            G+ C  C   T  R   C KC +CG  S CS
Sbjct: 757  GDRCPACGQPTYFRQEGCSKCASCG-HSTCS 786