Pairwise Alignments

Query, 1272 a.a., ribonucleoside-diphosphate reductase 2 alpha chain from Agrobacterium fabrum C58

Subject, 1231 a.a., Ribonucleoside-diphosphate reductase (NCBI) from Rhodospirillum rubrum S1H

 Score = 1602 bits (4149), Expect = 0.0
 Identities = 813/1277 (63%), Positives = 958/1277 (75%), Gaps = 51/1277 (3%)

Query: 1    MRIERRFTKPGQSSYAEIEFRKAVSEIKNPDGSVVFRLADIDVPAQFSQVATDVLAQKYF 60
            MRIER FT  GQS YA I FR+A+SEI+NPDGSVVFR   + VP  +SQVATDVLAQKYF
Sbjct: 1    MRIERHFTTDGQSPYAAIGFREAISEIRNPDGSVVFRADAVLVPDAWSQVATDVLAQKYF 60

Query: 61   RKAGVPKLLKKVEENDVPSFLWRSVADEKALKELPEAERYGSETDARQVFDRLAGTWAYW 120
            RKAG+P  L+ V E DVP +LWRS  D +AL+ LP  ER   E+D+RQVFDRLAGTW YW
Sbjct: 61   RKAGIPARLRPVPEADVPEWLWRSEPDTEALESLPTEERLVGESDSRQVFDRLAGTWTYW 120

Query: 121  GWKGKYFSTEEDASAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF 180
            GWKG YF  E DA AF DE+ +MLATQ  APNSPQWFNTGLHWAYGIDGP QGHFYVD  
Sbjct: 121  GWKGGYFDAESDAQAFFDEMRHMLATQVGAPNSPQWFNTGLHWAYGIDGPSQGHFYVDFK 180

Query: 181  TGKLTKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRG 240
            TG++ +S+SAYEHPQPHACFIQSV DDLVN+GGIMDLWVREARLFKYGSGTG+NFS LR 
Sbjct: 181  TGEVKRSESAYEHPQPHACFIQSVNDDLVNDGGIMDLWVREARLFKYGSGTGTNFSSLRA 240

Query: 241  EGEKLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVNE 300
             GE LSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMV+ D DHPDIE +I WK  E
Sbjct: 241  SGESLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVICDIDHPDIEEFITWKARE 300

Query: 301  EQKVAALVTGSKIVAKHLKAIMKACVNCEADNGD-CFDPAKNPALKREIRAAKKDMVPEN 359
            EQKVAALV+GSK+ +++L A+M+A    +  +GD  FDP  N  LK+ I  A+K M+PEN
Sbjct: 301  EQKVAALVSGSKLCSQNLNAVMEATRTWDGKDGDERFDPTVNKTLKKAILGARKAMIPEN 360

Query: 360  YVKRVIQFAEQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGNWNL 419
            Y+KRVIQ + QG+  I F+TYDTDWDSEAYLTV+GQNSNNSV + D FL+ VE DG W L
Sbjct: 361  YIKRVIQLSRQGFTGIDFETYDTDWDSEAYLTVAGQNSNNSVRVTDAFLQQVERDGAWTL 420

Query: 420  TARKDGKVMKTLKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEY 479
              R   K  +T+KAR LW++I+ AAWASADPGL F+TT+NDWHT P  G I ASNPCSEY
Sbjct: 421  RHRMSEKT-RTVKARTLWDEIAFAAWASADPGLQFDTTINDWHTCPESGRINASNPCSEY 479

Query: 480  MFLDDTACNLASLNLLQFKD--AKTKRIDIADYEHAVRLWTVVLEVSVMMAQFPSRQIAE 537
            MFLDDTACNLASLNL+ F+   A+    D   + HA RLWTVVLE+SV+MAQFPSR+IAE
Sbjct: 480  MFLDDTACNLASLNLITFRGQGAEAGLFDAVGFAHACRLWTVVLEISVLMAQFPSREIAE 539

Query: 538  RSYEYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEMAGELGPF 597
            RSY++RTLGLGYANIGGLLM++G+PYDSD GRA+ GAL+AIMTGV+YATSAEMA ++G F
Sbjct: 540  RSYKFRTLGLGYANIGGLLMANGLPYDSDAGRALCGALSAIMTGVAYATSAEMAEQMGAF 599

Query: 598  PSFAPNRDNMLRVIRNHRRAAHGQSEGYEGLSVNPVALIHADCTDQDLVAHATAAWDKAL 657
            P FA NR+ MLRVIRNHRRAA G+S+GYE LS+ PV L   +C   DLVA A  AWDKAL
Sbjct: 600  PGFAINREAMLRVIRNHRRAAFGESKGYEALSIAPVPLDIRNCPQADLVAVAQRAWDKAL 659

Query: 658  ELGEKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPE 717
            E+G  HG+RNAQ +VIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINR VP 
Sbjct: 660  EIGTAHGFRNAQVSVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRMVPS 719

Query: 718  SLRSLGYSESQIAEIEAYAVGHGNLNQAPAINPSTLKAKGFTDEKIEAVNAALKSAFDIK 777
            +LR+LGY E+ IA I  YAVGH  L  AP +N  +L AKGFT + +  +   L S FDI+
Sbjct: 720  ALRTLGYGEAAIAAIINYAVGHATLKNAPGVNAQSLIAKGFTQDALARIEEGLASCFDIR 779

Query: 778  FVFNQWTLGADFLKGTLKVSDEQLSDMSFNLLDHLGFAKKDIEAANVHVCGAMTLEGAPF 837
            F FN+W+LG DF +  LK+SD QL+D   +LL  LGF+K DIEAAN HVCGAMTLEGAP 
Sbjct: 780  FAFNKWSLGEDFCRDVLKMSDAQLNDPGVDLLTTLGFSKADIEAANTHVCGAMTLEGAPG 839

Query: 838  LKNEHLAVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCGA 897
            LK+EHLAVFDCA+PCG++GKR+LS  SHI MMAAAQPFISGAISKTINMPN+A+VEDC  
Sbjct: 840  LKDEHLAVFDCASPCGRLGKRFLSATSHIHMMAAAQPFISGAISKTINMPNEASVEDCKQ 899

Query: 898  AYMLSWKLALKANALYRDGSKLSQPLNASLVEDEDDEDFVEELIQQPLAQQAVTI-TEKI 956
            AYM SW+L LKANALYRDGSKLSQPL A ++E++DD++ +EE +    A +AV++  E +
Sbjct: 900  AYMTSWRLGLKANALYRDGSKLSQPLAAQVLEEDDDQETLEEAV----AGKAVSVQAEVV 955

Query: 957  VERVIERVSREREKLPNRRQGYTQKATVGGHKVYLRTGEFGDGRIGEIFIDMHKEGAAFR 1016
             ER++ERV  +R +LP+RR+GYTQKA VGGHKVYLRTGE+ DGR+GE+FIDMHKEGAAFR
Sbjct: 956  AERIVERVIAKRSRLPDRRKGYTQKAIVGGHKVYLRTGEYEDGRLGEVFIDMHKEGAAFR 1015

Query: 1017 AMMNNFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVQGNDAIKNATSILDYVFRELAV 1076
            ++MNNFAIAIS+GLQYGVPLEEYVEAFTFT+FEP GMVQGN+AIK ATSILDY+FRE+A+
Sbjct: 1016 SLMNNFAIAISIGLQYGVPLEEYVEAFTFTRFEPQGMVQGNEAIKMATSILDYIFREVAI 1075

Query: 1077 SYLGRHDLAHVDTSDFSNTALGKGIQEGKTNLLSTGWTRGYKPTLVSSNEGDRAASEPKG 1136
            SYLGR+DLAHV+  D     +G G +EG    L   W   +  T VS             
Sbjct: 1076 SYLGRNDLAHVEPEDLHPDTVGDGHEEGD---LEGTWEEDHIATTVS------------- 1119

Query: 1137 SATAAPARGSANVTSFAGSAARKLEPTVAITTSEIVSFKRDYEERAKELAEEIAEEVIDE 1196
                            AG     L          ++  K  + E     AE         
Sbjct: 1120 ----------------AGYVRSNL---------YVLKHKHHHRENGAVTAELAQSTGTHG 1154

Query: 1197 VVQEAQQTATALFSDKAAADAASAKAEAKKKENERRMRSI-AQGYTGNMCSECQNFTMVR 1255
                A   +++  S  A+    +            ++R    +GY G+ C EC NFT+VR
Sbjct: 1155 ATVGATSVSSSSMSSIASMSLGTGSGNGASDSKLSKIREARMKGYEGDSCGECGNFTLVR 1214

Query: 1256 NGTCEKCDTCGATSGCS 1272
            NGTC KCDTCG+TSGCS
Sbjct: 1215 NGTCMKCDTCGSTSGCS 1231