Pairwise Alignments

Query, 1272 a.a., ribonucleoside-diphosphate reductase 2 alpha chain from Agrobacterium fabrum C58

Subject, 765 a.a., putative adenosylcobalamin(B12)-dependent ribonucleotide reductases from Phaeobacter inhibens DSM 17395

 Score =  116 bits (290), Expect = 9e-30
 Identities = 99/330 (30%), Positives = 141/330 (42%), Gaps = 56/330 (16%)

Query: 385 DSEAYLTVSGQNS-----NNSVSLKDDFLRAVENDGNWNLTARKDGKVMKTLKARDLWEK 439
           D EA++T     +     N SV + D F+ AV+ DG+W L    DGKV +T++ARDLW K
Sbjct: 174 DIEAFITAKSDPARLRMFNMSVLVTDPFMEAVKADGSWELIF--DGKVYQTVQARDLWNK 231

Query: 440 ISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEYMFLDDTACNLASLNLLQFKD 499
           I  A +  A+PG+ F   +N  +       I A+NPC E       AC L S+NL +   
Sbjct: 232 IMQATYDYAEPGVIFIDRINKANNLSYVEQIAATNPCGEQPLPPYGACLLGSINLARLVK 291

Query: 500 AKTKRIDIADYE-------HAVRLWTVVLEVSVMMAQFPSRQIAERSYEYRTLGLGYANI 552
              +     D E        AVR+   V++VS    +FP    A+ +   R +GLG   +
Sbjct: 292 NPFETESELDPEGLKDLVATAVRMMDNVVDVS----KFPLDAQAQEAQNKRRIGLGVTGL 347

Query: 553 GGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEMAGELGPFPSFAPNRDNMLRVIR 612
              L+  G+ Y SDE           +   +Y  S ++A E G FP F            
Sbjct: 348 ADALLMLGLRYGSDEAARQTEDWLHAIARAAYLASVDLAKEKGAFPLF------------ 395

Query: 613 NHRRAAHGQSEGYEGLSVNPVALIHADCTDQDLVAHATAAWDKALELGEKHGYRNAQTTV 672
                    ++ Y         L      D D         +   +   +HG RNA  T 
Sbjct: 396 --------DADAY---------LASGTMMDMD---------EDVRDAIREHGIRNALLTS 429

Query: 673 IAPTGTIGLVMDCDTTGIEPDFALVKFKKL 702
           IAPTGTI L     ++GIEP FA    +K+
Sbjct: 430 IAPTGTISLYAGNVSSGIEPVFAYAYTRKV 459



 Score = 59.3 bits (142), Expect = 1e-12
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 4/117 (3%)

Query: 182 GKLTKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRGE 241
           G++T             CF+     D ++  GI D+    A   + G G G +FS +R  
Sbjct: 69  GRITAGAGTARQVTLFNCFVMGTVPDSMS--GIFDMLKEAALTMQQGGGIGYDFSTIRPR 126

Query: 242 GEKLSG-GGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWK 297
           G  + G    +SG +SF+ + D     I S G+ RR A M  +  DHPDIEA+I  K
Sbjct: 127 GADVKGVAADASGPLSFMDVWDAMCRTIMSAGS-RRGAMMATMRCDHPDIEAFITAK 182



 Score = 54.7 bits (130), Expect = 3e-11
 Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 22/162 (13%)

Query: 855  IGKRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCGAAYMLSWKLALKANALYR 914
            +  + LS   H++M AAAQ +I  +ISKTIN P D + +     YM +W L  K    YR
Sbjct: 493  VNAQTLSPSEHVKMQAAAQKWIDSSISKTINCPEDISFDSFKDVYMQAWDLGCKGCTTYR 552

Query: 915  ----DGSKLSQPLNASLVEDEDDEDFVEELIQQPLAQQAVTITEKIVERVIERVSREREK 970
                 GS LS   +A     E  +   E  I +  A + V ++E +              
Sbjct: 553  PNDVTGSVLSVSESADTAPGETADAPHEADISESGAAEVVYMSEPL-------------D 599

Query: 971  LPNRRQGYTQKA--TVGGHKVYLRTGEF---GDGRIGEIFID 1007
             P   +G+T K       H +YL   +    G  R  E+FI+
Sbjct: 600  RPQSLEGHTYKLKWPDSEHAIYLTINDIIINGHRRPFEVFIN 641