Pairwise Alignments

Query, 1272 a.a., ribonucleoside-diphosphate reductase 2 alpha chain from Agrobacterium fabrum C58

Subject, 1224 a.a., ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 1626 bits (4211), Expect = 0.0
 Identities = 830/1275 (65%), Positives = 957/1275 (75%), Gaps = 54/1275 (4%)

Query: 1    MRIERRFTKPGQSSYAEIEFRKAVSEIKNPDGSVVFRLADIDVPAQFSQVATDVLAQKYF 60
            M+IER FTK G  +YA IEF    SEI+NPDG+VVFRL +++VP+ +SQVA+DV+AQKYF
Sbjct: 1    MKIERHFTKDGTDAYAGIEFSITASEIRNPDGTVVFRLDEVEVPSSWSQVASDVIAQKYF 60

Query: 61   RKAGVPKLLKKVEENDVPSFLWRSVADEKALKELPEAERYGSETDARQVFDRLAGTWAYW 120
            RKAGVP  LK V E  VP FLWRSVADE AL +LP  +RYG ET ARQVF RLAG WAYW
Sbjct: 61   RKAGVPAALKPVREKGVPEFLWRSVADEAALAKLPAEKRYGGETSARQVFRRLAGAWAYW 120

Query: 121  GWKGKYFSTEEDASAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF 180
            GWKG YFSTE DA  + DE+  MLA Q  APNSPQWFNTGLHWAYGIDGP QGH+YVD  
Sbjct: 121  GWKGGYFSTEADARTYFDEMQLMLARQMAAPNSPQWFNTGLHWAYGIDGPAQGHYYVDHK 180

Query: 181  TGKLTKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRG 240
            +GKLTKS S+YEHPQPHACFIQSV DDLVN+GGIMDLWVREARLFKYGSGTG+NFS LR 
Sbjct: 181  SGKLTKSTSSYEHPQPHACFIQSVADDLVNDGGIMDLWVREARLFKYGSGTGTNFSSLRA 240

Query: 241  EGEKLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVNE 300
            EGE LSGGGKSSGLM FLKIGDRAAGAIKSGGTTRRAAKMV+ DADHPDIE +++WKV E
Sbjct: 241  EGEALSGGGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVICDADHPDIEEFVNWKVKE 300

Query: 301  EQKVAALVTGSKIVAKHLKAIMKACVNCEADNGDCFDPAKNPALKREIRAAKKDMVPENY 360
            EQKVA+LV GSK+    L  I  A    +    D  DP KN ALK  IRAAKK  +PE Y
Sbjct: 301  EQKVASLVAGSKMHEAKLNEIFAAIGEWDGLGEDAVDPTKNAALKSAIRAAKKVQIPETY 360

Query: 361  VKRVIQFAEQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGNWNLT 420
            +KRV+ +A+QGY  I+F TYDTDWDSEAY +VSGQNSNNSV + D FL+AV++D +W L 
Sbjct: 361  IKRVLDYAKQGYASIEFPTYDTDWDSEAYNSVSGQNSNNSVRVTDAFLKAVKDDADWELI 420

Query: 421  ARKDGKVMKTLKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEYM 480
             R DGKV KT+KAR+LWE I HAAWA ADPG+ F+ T+NDWHT P +G IR SNPCSEYM
Sbjct: 421  RRTDGKVAKTIKARELWETIGHAAWACADPGIQFHDTVNDWHTCPEDGAIRGSNPCSEYM 480

Query: 481  FLDDTACNLASLNLLQF-KDAKTKRIDIADYEHAVRLWTVVLEVSVMMAQFPSRQIAERS 539
            FLDDTACNLAS+NLL F +D K    D   Y HA RLWT+ LE+SV+MAQFPS++IA+RS
Sbjct: 481  FLDDTACNLASMNLLTFYRDGK---FDSEGYMHAARLWTLTLEISVLMAQFPSKEIAQRS 537

Query: 540  YEYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEMAGELGPFPS 599
            Y++RTLGLGYANIGGLLM+ G  YDSDEGRA+ GALTAIMTGVSYATSAE+A E+GPFP 
Sbjct: 538  YDFRTLGLGYANIGGLLMNMGYGYDSDEGRALCGALTAIMTGVSYATSAEIAAEVGPFPG 597

Query: 600  FAPNRDNMLRVIRNHRRAAHGQSEGYEGLSVNPVALIHADCTDQDLVAHATAAWDKALEL 659
            +A N D+MLRVIRNHR AA+G+++GYE L+  PVAL HA+C DQ LV  A ++WD+AL+L
Sbjct: 598  YAKNADHMLRVIRNHRNAAYGKTDGYEALATKPVALDHANCPDQTLVKLAMSSWDEALKL 657

Query: 660  GEKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPESL 719
            GE+HGYRNAQ TVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINR+VP +L
Sbjct: 658  GEQHGYRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRSVPAAL 717

Query: 720  RSLGYSESQIAEIEAYAVGHGNLNQAPAINPSTLKAKGFTDEKIEAVNAALKSAFDIKFV 779
             +LGYS +QI EI AYAVGHG L  AP +N + L   GF  E+IE + AAL SAFDI+FV
Sbjct: 718  DTLGYSSAQIEEIIAYAVGHGTLGNAPGVNHTALIGHGFGPEQIEKIEAALPSAFDIRFV 777

Query: 780  FNQWTLGADFLKGTLKVSDEQLSDMSFNLLDHLGFAKKDIEAANVHVCGAMTLEGAPFLK 839
            FNQWTLG  F    L +   +L+D +F++L HLGFAKKDI+ AN HVCG MTLEGAPFLK
Sbjct: 778  FNQWTLGEAFCTEVLGIPAAKLNDPTFDMLRHLGFAKKDIDLANDHVCGTMTLEGAPFLK 837

Query: 840  NEHLAVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCGAAY 899
             EH +VFDCANPCGK GKR+LSV+SHI MMAAAQ FISGAISKTINMPNDAT+EDC  AY
Sbjct: 838  AEHYSVFDCANPCGKRGKRFLSVDSHIHMMAAAQSFISGAISKTINMPNDATIEDCQKAY 897

Query: 900  MLSWKLALKANALYRDGSKLSQPLNASLVEDEDDEDFVEELIQQPLAQQAVTITEKIVER 959
             LSW L  KANALYRDGSKLSQPL A+LV  EDDE+  E L      ++A  I EKIVE+
Sbjct: 898  ELSWSLGTKANALYRDGSKLSQPLAAALV--EDDEEAAEVLETGSTMEKAQVIAEKIVEK 955

Query: 960  VI--ERVSREREKLPNRRQGYTQKATVGGHKVYLRTGEFGDGRIGEIFIDMHKEGAAFRA 1017
            V+  E +   REKLP RR+GYTQKA VGGHKVYLRTGE+ DG +GEIFIDMHKEGA FRA
Sbjct: 956  VVIKEVIKAHREKLPERRKGYTQKAIVGGHKVYLRTGEYADGNLGEIFIDMHKEGAGFRA 1015

Query: 1018 MMNNFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVQGNDAIKNATSILDYVFRELAVS 1077
            MMNNFAIA+S+GLQYGVPLEE+V+AFTFTKFEPAGMVQGND+IKNATSILDY+FRELAVS
Sbjct: 1016 MMNNFAIAVSVGLQYGVPLEEFVDAFTFTKFEPAGMVQGNDSIKNATSILDYIFRELAVS 1075

Query: 1078 YLGRHDLAHVDTSDFSNTALGKGIQEGKTNLLSTGWTRGYKPTLVSSNEGDRAASEPKGS 1137
            YL R DLAHV     +   +G+G +EG +N+                        E   S
Sbjct: 1076 YLDRTDLAHVAPQGATFDDIGRGEEEGVSNV-----------------------KEMSDS 1112

Query: 1138 ATAAPARGSANVTSFAGSAARKLEPTVAITTSEIVSFKRDYEERAKELAEEIAEEVIDEV 1197
            A +        ++S      R  +  V +            +   K +  EI   V+  +
Sbjct: 1113 AASKSLEVLKQISSTGYLRKRMPQELVVL------------QGGGKPVTAEI--PVVGTI 1158

Query: 1198 VQEAQQTATALFSDKAAADAASAKAEAKKKENERRMRSIAQGYTGNMCSECQNFTMVRNG 1257
                  T TAL S+   A   S    AK K          QGY G  C EC N+T+VRNG
Sbjct: 1159 GGGEVATMTALRSETTVATTTSIDPRAKAK---------MQGYEGEACGECGNYTLVRNG 1209

Query: 1258 TCEKCDTCGATSGCS 1272
            TC KC+TCG TSGCS
Sbjct: 1210 TCMKCNTCGGTSGCS 1224