Pairwise Alignments

Query, 1272 a.a., ribonucleoside-diphosphate reductase 2 alpha chain from Agrobacterium fabrum C58

Subject, 731 a.a., class 1b ribonucleoside-diphosphate reductase subunit alpha from Bifidobacterium breve UCC2003

 Score = 65.9 bits (159), Expect = 1e-14
 Identities = 92/388 (23%), Positives = 155/388 (39%), Gaps = 58/388 (14%)

Query: 424 DGKVMKT-LKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEYMFL 482
           D ++ KT + AR  +  I+   + S  P + F  T+N    +P EG +  SN CSE + +
Sbjct: 349 DDRIKKTYIDARKFFTTIAELQFESGYPYIVFEDTVN--RANPIEGRVTMSNLCSEILQV 406

Query: 483 D----------------DTACNLASLNLLQFKDAKTKRIDIADYEHAVRLWTVVLEVSVM 526
                            D +CNL SLN+ +  D           E A+R  T V E + +
Sbjct: 407 QEPSAYNEDLTYAHVGRDISCNLGSLNIAKAIDGGLTHT----VETAIRALTSVAEHTSI 462

Query: 527 MAQFPSRQIAERSYEYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYAT 586
            A  PS  I   + E   +GLG  N+ G L   GI Y S+EG          +   +Y  
Sbjct: 463 DA-VPS--IRRANEEGHAIGLGQMNLHGFLAREGIHYGSEEGLDFTDMYFMTVAYHAYRA 519

Query: 587 SAEMAGELG-PFPSFAPNRDNMLRVIRNHRRAAHGQSEGYEGLSVNPVALIHADCTDQDL 645
           S  +A E G PF SFA +         ++ + A GQ   ++  +    +L       ++L
Sbjct: 520 SHALAVEHGHPFKSFATS---------DYAKPA-GQGNYFDKYTDGRRSLEPRTAKVREL 569

Query: 646 VAH------ATAAWDKALELGEKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKF 699
            A         + W+   +   K G  N     + PTG+I  + +  T+ I P  + ++ 
Sbjct: 570 FAKYGIEIPTVSDWETLRDSILKDGIYNQNLQAVPPTGSISYI-NHSTSSIHPIASKIEI 628

Query: 700 KKLAGGG-------YFKIINRAVPESLRSLGYSESQIAEIEAYAVGHGNLNQAPAIN--- 749
           +K    G       Y    N    +    +G+     A ++ YA    +++Q  ++    
Sbjct: 629 RKEGKIGRVYYPAAYMTNDNLEYYKDAYEIGWK----AIVDTYAEATQHVDQGLSLTLFF 684

Query: 750 PSTLKAKGFTDEKIEAVNAALKSAFDIK 777
           P T   +     +I A    +K+ + I+
Sbjct: 685 PDTATTRDLNKAQIYAWRKGIKTLYYIR 712



 Score = 36.2 bits (82), Expect = 1e-05
 Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 195 QPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRGEGEKLSG-GGKSSG 253
           +P +CF+  +ED++ +    ++  ++   L K G G     S LR  G  +     +SSG
Sbjct: 186 EPVSCFLVRIEDNMESISRGINAALQ---LSKRGGGVALLLSNLRELGAPIKHIENQSSG 242

Query: 254 LMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWK---VNEEQKVAALVTG 310
           ++  +K+ + +       G  R+ A  V ++A HPDI  ++D K    +E+ ++ +L  G
Sbjct: 243 VIPVMKLLEDSFSYANQLGA-RQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKSLALG 301