Pairwise Alignments

Query, 265 a.a., exonuclease III from Agrobacterium fabrum C58

Subject, 265 a.a., Exodeoxyribonuclease III from Synechococcus elongatus PCC 7942

 Score =  196 bits (498), Expect = 4e-55
 Identities = 111/263 (42%), Positives = 151/263 (57%), Gaps = 13/263 (4%)

Query: 1   MKIATWNINGVKARIENLCQWLKDSSPDIVCLQEIKSVDEGFPRLEIEALGYHIETHGQK 60
           M+IATWN+N V++R+E+L +WL D + DIVCLQE K VDE FP   ++ALGYH    GQK
Sbjct: 1   MRIATWNVNSVRSRLEHLQRWLTDQTLDIVCLQETKVVDEQFPLEPLQALGYHCAIAGQK 60

Query: 61  GFNGVALLSKVKPDEVNRGLPG-------DDADEQARFIEGVFSVEGGAIRVCSLYLPNG 113
            +NGVA+LS+    +V  G           D DEQ R I G      G +R+ +LY+PNG
Sbjct: 61  SYNGVAILSRQPLADVQIGFGAVLGAEAVGDLDEQKRVISG----RSGDLRIINLYVPNG 116

Query: 114 NPPDDPVKYPYKLAWMERLRRFAEDRLAMEEPLILAGDYNVIPEPFDCHDPRVWEGDALF 173
           +      KY YKL W+  L+++       E  + + GD+N+  E  D +DP   E   + 
Sbjct: 117 SELGSE-KYDYKLRWLTCLQQYLTVLGDRESQIHICGDFNIALEDRDIYDPAGKETHIMS 175

Query: 174 LPKTRAAFRK-LENLGFTDAARATTDAAGLYSFWDYQAGAWPKNNGIRIDHLMLSAEAAD 232
            P  R A R+ + +LGF DA R     A  +S+WDY+ GA+ +N G RIDH  LS  A  
Sbjct: 176 SPTEREALRQSVLSLGFVDAFRLFEAGADQFSWWDYRTGAFRRNRGWRIDHHYLSESAKA 235

Query: 233 RLQSVEIEKHVRAWEKPSDHVPV 255
           R  +  I++  R WEKPSDH PV
Sbjct: 236 RAIACHIDREPRTWEKPSDHTPV 258