Pairwise Alignments

Query, 399 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (339), Expect = 3e-36
 Identities = 103/384 (26%), Positives = 182/384 (47%), Gaps = 31/384 (8%)

Query: 18  LVVIAGVAALCMNLFLPSLSAMALYFEIDYAVMQFAVSGYLAATALLQLVIGPLSDLFGR 77
           + ++A V      +++PS+  MA  F +  A +Q  ++ YL    L Q V G LSD  GR
Sbjct: 27  IAILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGR 86

Query: 78  RPVMLASITIMIAATLVCMLASDITVFMIGRVAQA-AVVSGFVLARAIVRDMVPMEQAAS 136
           +P+++A + I I  +L+ + A   + F+IG   Q   +  G  ++R + RD     +   
Sbjct: 87  KPIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELHK 146

Query: 137 MIGYVTMGMSVVPMVGPTVGGLLNDFSGWQSSFALLALLGAGILVLAWFDLGETNQSKSA 196
           +   ++M +   P+V P +GG L +  GW+SS+  L+L    +++     + ET  + + 
Sbjct: 147 VNSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATAR 206

Query: 197 SFSQQFHAWPELLRSPLFWGY--ALTSTFSSGMFFSFLGGAPFVGSVLYGLTPAMLGLQF 254
                  ++  +L    F GY   L +TF+    F    G   +G VL GL    + L F
Sbjct: 207 KKEPVLRSYHYVLSDRRFQGYLICLVATFAGLAVFEAAAGV-LLGGVL-GLPATTVSLLF 264

Query: 255 FFMASGYMLGNFVSG--------RYASQIGISRMMLSGNVIAIAGIV---TAIALITGGA 303
                GY+ G ++S         + A  +G+  ++    VI + G++   TA++LI GGA
Sbjct: 265 VLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLI-GGA 323

Query: 304 ESAYAFFVPLALIGVGNGVTLPSANAGMVSVQPHLAGSASG-LGGAMTIGGGAALSVLAS 362
                      +  +G G+  P+A  G +S  P+ AG+    LGG   +G G  L+ L +
Sbjct: 324 ----------TIYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAG--LATLFA 371

Query: 363 SVLSKEDGTWPLLLVILATGLVAL 386
           ++    D   PL +++L   ++AL
Sbjct: 372 AMFPASD-QLPLGIIMLLMSVLAL 394