Pairwise Alignments

Query, 399 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  104 bits (260), Expect = 4e-27
 Identities = 97/398 (24%), Positives = 175/398 (43%), Gaps = 25/398 (6%)

Query: 3   SSRFLDRTTPPHIITLVVIAGVAALCMNLFLPSLSAMALYFEIDYAVMQFAVSGYLAATA 62
           S+RF  R TP  +  +++  G   +  +++LPSL  ++   ++D A  Q  V+ +L    
Sbjct: 6   STRF--RRTPMLLAMMIIATGQVGV--SIYLPSLPLISRDLQVDQASAQMLVTLFLLGFG 61

Query: 63  LLQLVIGPLSDLFGRRPVMLASITIMIAATLVCMLASD-ITVFMIGRVAQA-AVVSGFVL 120
             QL  G LSD  GRRP  L    I +  T++C++ SD       GR+ Q     S  VL
Sbjct: 62  GSQLFYGALSDAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVL 121

Query: 121 ARAIVRDMVPMEQAASMIGYVTMGMSVVPMVGPTVGGLLNDFSGWQSSFALLALLGAGIL 180
            R+++RD          + Y+++  S++P++ P +GG L     WQS F  + L    I 
Sbjct: 122 GRSVLRDSYDGFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIF 181

Query: 181 VLAWFDLGETNQSKSASFSQQFHAWPELL--RSPLFWGYALTSTFSSGMFFSFLGG---- 234
            L    L ET       + ++   W  ++   + L     +TS+ +S  + S+L      
Sbjct: 182 TLGLMILPET-----LPYPKRRVQWRGIVINYAKLLTNQQVTSS-ASYNWLSYLASLVTL 235

Query: 235 --APFVGSVLYGLTPAMLGLQFFFMASGYMLGNFVSGRYASQIGISRMMLSGNVIAIAGI 292
              PF+     G+T A  G      +SG +LG+ +     S+  + +++  G  I++   
Sbjct: 236 SILPFLLQKQLGMTAADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLL--GCAISLMVF 293

Query: 293 VTAIALITGGAESAYAFFVPLALIGVGNGVTLPSANAGMVSVQPHLAGSASGLGGAMTIG 352
                L+T    S +        + +  G++ P A   ++S     AG+ S L G++ +G
Sbjct: 294 AGLWLLLT--EFSVFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMG 351

Query: 353 -GGAALSVLASSVLSKEDGTWPLLLVILATGLVALLTT 389
             G     L    ++ ++      +++  T L  L+ T
Sbjct: 352 IAGLLGGYLVEHWVTSQNAMGVFYILVGITMLSVLIAT 389