Pairwise Alignments

Query, 399 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (404), Expect = 8e-44
 Identities = 110/395 (27%), Positives = 198/395 (50%), Gaps = 15/395 (3%)

Query: 1   MKSSRFLDRTTPPHIITLVVIAG----VAALCMNLFLPSLSAMALYFEIDYAVMQFAVSG 56
           M +S    + TP   + L ++ G    +  L ++++LP++  +A  F ++   +Q  ++ 
Sbjct: 1   MSASTVNTQQTPQMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTA 60

Query: 57  YLAATALLQLVIGPLSDLFGRRPVMLASITIMIAATLVCMLASDITVFMIGRVAQA-AVV 115
           Y A  A+ QL+ GPL+D FGRRPVML  I +   A +V    + I      R AQ  A  
Sbjct: 61  YTAGFAIGQLLHGPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGA 120

Query: 116 SGFVLARAIVRDMVPMEQAASMIGYVTMGMSVVPMVGPTVGGLLNDFSGWQSSFALLALL 175
           +  V+ +A+VRDM   E  A  + +VT+ +++ P+V P +GG L  + GW+S F +LAL 
Sbjct: 121 AAAVVIQAVVRDMFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALF 180

Query: 176 GAGILVLAWFDLGET---NQSKSASFSQQFHAWPELLRSPLFWGYALTSTFSSGMFFSFL 232
            A ++ +  + + ET      +   F      + +L ++P+  G   +  FS    F+FL
Sbjct: 181 AALVIAMVMWKIPETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFL 240

Query: 233 GGAPFVGSVLYGLTPAMLGLQFFFMASGYMLGNFVSGRYASQIGISRMMLSGNVIAI-AG 291
               FV   +YG++P   G  F       +    ++GR+  +IG   M+     + + AG
Sbjct: 241 TAGAFVYIDIYGVSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAG 300

Query: 292 IVTAIALITGGAESAYAFFVPLALIGVGNGVTLPSANAG-MVSVQPHLAGSASGLGGAMT 350
           I   ++ +    +      VP  ++ VG   T+ S + G ++S  P +AG+AS L G + 
Sbjct: 301 IGLFVSWV---LDWGLWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLR 357

Query: 351 IGGGAALSVLASSVLSKEDGTWPLLLVILATGLVA 385
            G G+ +  + +++   E  TWP++ V+ A  +++
Sbjct: 358 FGTGSIIGAVVAALPGTE--TWPMIFVMAACSVLS 390