Pairwise Alignments

Query, 356 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 976 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  109 bits (273), Expect = 3e-28
 Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 5/187 (2%)

Query: 155 VNRHAEEMHQVRLELDEYKRIANTDSLTRLSNRRAFDDRLASVYDSSIGL-QYTTLVLLD 213
           V + A +  ++RL+ ++++R++  D LT L+NRRAFD  L   +       Q  ++ LLD
Sbjct: 786 VEQVALQTQKLRLQAEKFERLSKEDDLTGLANRRAFDMYLKQAFSRLQNPDQQVSIALLD 845

Query: 214 IDHFKRINDTFGHPVGDKILATVASVIRANVRKDGFVARSGGEEFAIILDGNTPEEVMVM 273
           IDHFK+IND + H +GD+ +  V+  +   V     VAR GGEEF I+  G+ P++    
Sbjct: 846 IDHFKQINDRYSHIIGDQAIVAVSQELLGYVGDKTRVARWGGEEFTILYVGD-PKQAWGY 904

Query: 274 CERIRLSLESTPFRNSRSGADYGTVTISIGFASAARASNPSELYGHADTALYHAKETGRN 333
            E++R  +E         G +   VT+SIGFA A +A +   +   AD AL  AK+ GRN
Sbjct: 905 FEKLRCKIEQVDLSAVAPGLN---VTVSIGFADAQQAESYETVLKLADHALLTAKKLGRN 961

Query: 334 RSVFYED 340
           R V  E+
Sbjct: 962 RVVKSEE 968