Pairwise Alignments

Query, 356 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 493 a.a., Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain (NCBI) from Rhodospirillum rubrum S1H

 Score =  102 bits (254), Expect = 2e-26
 Identities = 75/222 (33%), Positives = 115/222 (51%), Gaps = 13/222 (5%)

Query: 136 LLADATGSKIIDGEKTFNDVNRHAEEMHQVRLELDEYKRIANTDSLTRLSNRRAFDDRLA 195
           L+ D T ++ +DG      +     E++  + +  E  R A TD LT L+NRR+F+    
Sbjct: 274 LIIDVTETRPLDGFPL--RMTGIVLEVNDRKTQELELARTAATDPLTGLANRRSFEALAT 331

Query: 196 SVYDSSIGLQYTTLVLLDIDHFKRINDTFGHPVGDKILATVASVIRANVRKDGFVARSGG 255
            + ++  G    TL+++DID FK IND FGH  GD++L  +A V R+ +R    + R GG
Sbjct: 332 RLLENKPGSG--TLLVIDIDLFKHINDCFGHAAGDEVLRHLAIVGRSVLRDGDLIGRLGG 389

Query: 256 EEFAIILDGNTPEEVMV---MCERIRLSLESTPFRNSRSGADYGTVTISIGFASAARASN 312
           EEFA++L  + PE   V   +C+ +R    + P  +    +    +TISIG A      +
Sbjct: 390 EEFAVLLQMDGPEAYAVADRLCQAVREMAVTAP--SWEHSSVVVKITISIGIAHPCPFED 447

Query: 313 P----SELYGHADTALYHAKETGRNRSVFYEDGMQNNYTGKN 350
           P    SE    AD ALY AK+ GRN+     +G Q+  +  N
Sbjct: 448 PKFALSEALRRADRALYGAKKRGRNQICHDTEGRQSAISRDN 489