Pairwise Alignments

Query, 356 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 347 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  129 bits (324), Expect = 1e-34
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 13/320 (4%)

Query: 22  MRSMGVSPIPRNYSLFYEAYIGSNPALTK---DLAALGNRVTQEDLDELSSRYGEGNPNR 78
           M  + +   P NY+++YE + G N  L +    L A   + T E    L + +       
Sbjct: 29  MSELNIPVTPDNYAVWYEYFRGVNLDLKRAIDTLVASRAQFTAEVNAGLYNSFIREQSPE 88

Query: 79  SIDDAQDKLRRELEALLGTLKREQSSIENYNRILGETRQRIDDKNAASNNILRNAISLLA 138
            I++ Q + +  +   +  L    +    +N  L   +Q I          L   +  LA
Sbjct: 89  VIENVQIETQILINNFMTRLSEVTAGTAQFNLSLTTFQQNISQD--PDPKTLERLVDTLA 146

Query: 139 DATGSKIIDGEKTFNDVNRHAEEMHQVRLELDEYKRIANTDSLTRLSNRRAFDDR-LASV 197
           +     +I   +   ++    +E+  ++ E+++      TD LT L NRRAFD+  L  +
Sbjct: 147 EEVSQVVISNRQMEANLKTMNQEVAALKAEMEDLNIAVMTDQLTSLRNRRAFDEEVLGHI 206

Query: 198 YDSSIGLQYTTLVLLDIDHFKRINDTFGHPVGDKILATVASVIRANVRKDGFVARSGGEE 257
                  + ++L+L+DID+FK+ NDT GH VGDK+LA +A  ++  V+ D FVAR GGEE
Sbjct: 207 QRFRREQRLSSLLLVDIDNFKQFNDTHGHLVGDKVLAYIALALKQGVKGDDFVARYGGEE 266

Query: 258 FAIILDGNTPEEVMVMCERIRLSLESTPFRNSRSGAD----YGTVTISIGFASAARASNP 313
           F I+L        MV+ E++R  +     R+   G D     G +T+SIG A+     + 
Sbjct: 267 FVILLPDTEHSGAMVVAEQLRARIAE---RHLSIGKDKKLSLGAITVSIGVATLRLDDDR 323

Query: 314 SELYGHADTALYHAKETGRN 333
                 AD ALY AK  GRN
Sbjct: 324 ESYLVRADEALYRAKSAGRN 343