Pairwise Alignments

Query, 510 a.a., long-chain fatty acid-CoA ligase from Agrobacterium fabrum C58

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  176 bits (445), Expect = 3e-48
 Identities = 145/527 (27%), Positives = 244/527 (46%), Gaps = 58/527 (11%)

Query: 13  ARAASEDQALVHKEQSL--TYREFAEAAAHCAAALHEAGTERGDRVVIYLPRGFEECWSI 70
           A+   + + LV+ +++L  TY+EF E     A  L E G ++GD + I+     +    +
Sbjct: 16  AQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFM 75

Query: 71  FGVSMASGVFVPVNALLKAQQIRHIV--TDCGAKIVISSMAMMDELKAALTDLPDIT--- 125
           F  +    V V VN   K+ ++ +++  +D  A  +I S   ++ L+     +P++    
Sbjct: 76  FATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQ 135

Query: 126 --------------------------------ILLAEEITARKSAPARPSAAIGEDLAAI 153
                                           +LL   ++  K   A+      +D+  +
Sbjct: 136 RGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLD-SDDVINM 194

Query: 154 LYTSGSTGSPKGVMLSHRNLLAGARIVRTYLDITGKDRILSLLPFSFDYGLNQ-LLTAVE 212
            YTSG+TG PKGVML+H+N+L     +      T ++R+   +P    +G+   +L  + 
Sbjct: 195 QYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLT 254

Query: 213 QGATTIISTFRLGDEIVRDLRDQAITGLAGVPTIWAILTRAAPLLAKTPLPHLRYLTNSG 272
            G T ++        ++  ++ +  T + GVPT++ I   + P+     L  LR    +G
Sbjct: 255 HGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMF-IAEFSHPMFEMFDLSSLRTGIMAG 313

Query: 273 GRVPQETVKALREKLPDTKIYLMYGLTEA---FRSTFLPPDEIDRRPTSIGKAIPECEIF 329
              P E +K +   +   +I + YGLTEA   F  T +  D  ++R  S+GKA+P CE+ 
Sbjct: 314 STCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVD-DPFEKRVESVGKAMPHCEVK 372

Query: 330 IVT-DKGQRAKPGEPGILVHRGPTVSLGYWNRPEDTAKVLRPHPFIPAARGGETVCYSGD 388
           I+  + G+   PG  G +  RG  V  GY+  PE TA+V+    ++          +SGD
Sbjct: 373 IIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWL----------HSGD 422

Query: 389 LAVEDEDGFFSFVARNDAMIKSSGYRISPTEVEESLMSTGLFREVAVIGLPDPFAGEKVH 448
           LAVEDEDG++  V R   MI   G  I P E+EE L +     +  V+G+PD   GE V 
Sbjct: 423 LAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVG 482

Query: 449 A-VATAASETIDVSAALKKAAEMLAPFMIPRAIELVERLPITANGKV 494
           A V       I        A E +A + +P+ + +VE  P+TA+GK+
Sbjct: 483 AFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKI 529