Pairwise Alignments

Query, 386 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 382 a.a., ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A from Pseudomonas fluorescens FW300-N2E2

 Score =  224 bits (571), Expect = 3e-63
 Identities = 134/333 (40%), Positives = 197/333 (59%), Gaps = 8/333 (2%)

Query: 60  IDLSAVEAIDTTGAWII------QRLRKDLEASGATVTLTGNDRIEDVIGQLPDKAEMDV 113
           IDL+ + A+DT GA ++      +RL K  E    ++       ++ V   L D      
Sbjct: 52  IDLNGLGALDTAGASLLVELLGSERLGKTTEHPDCSLPAAERALLQTVYCSLTDFCVPVK 111

Query: 114 EPVAREGLVERIFAPIGQAVVQNGADFLAGMYILGSAVRGAQMKLGRGRGVSPAAIVNQI 173
           EP  +  ++ ++   IG+AV +   D L  +  +G  +      L R R      +V  I
Sbjct: 112 EP--QVSVLTQLLTRIGRAVEKVWQDTLQLLGFVGLILETLARNLFRPRRWRMTPMVVHI 169

Query: 174 DHMGVRAVPIIMLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLLTAIMI 233
           +  G+ A PI+ L++FL+GA++A  GA  L  FGA +F VDLV    LRE GVLLTAI++
Sbjct: 170 EQTGLDAAPIVALLTFLVGAVVAFLGATVLADFGASIFTVDLVAFSFLREFGVLLTAILM 229

Query: 234 AGRSGSAITAEIGSMKMREEIDALKVIGLNPVGVLVFPRLVALTIALPLLTILANFAALF 293
           AGR+ SA TA+IGSMK  EEIDA++ +GL+PV +LV PR++AL +ALP+LT LA  + + 
Sbjct: 230 AGRTASAFTAQIGSMKANEEIDAIRTLGLDPVELLVIPRVLALLVALPMLTFLAMLSGII 289

Query: 294 GAAIVALAYSGITFEVFLSRLHGAVEESTIAAGMIKAPFMALIIGIVAAVEGMKVGGSAE 353
           G  +V     GI+  +FL+ L   +       GM+KAP  A +I  V  +EG KV GSAE
Sbjct: 290 GGGVVCALSLGISPAMFLTLLQSDIGVQHFLVGMVKAPIFAFLIAAVGCLEGFKVSGSAE 349

Query: 354 SLGKHVTSSVVKSIFVVILVDGLFAIFYAAIDF 386
           S+G H TSSVV+SIFVVI++D + A+F+  +++
Sbjct: 350 SVGAHTTSSVVQSIFVVIVLDAVAALFFMEMNW 382