Pairwise Alignments

Query, 710 a.a., DNA gyrase subunit B from Agrobacterium fabrum C58

Subject, 805 a.a., DNA gyrase subunit B from Pseudomonas syringae pv. syringae B728a

 Score =  426 bits (1095), Expect = e-123
 Identities = 246/564 (43%), Positives = 348/564 (61%), Gaps = 19/564 (3%)

Query: 72  YGASSIRVLEGLEPVRMRPGMYIGGTDE-KALHHLFAEVIDNSMDEAVAGHANFIEVHLD 130
           Y +SSI+VL+GL+ VR RPGMYIG TD+   LHH+  EV+DNS+DEA+AGH + I + + 
Sbjct: 7   YDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIH 66

Query: 131 AEGFLTVTDNGRGIPVENHPQVPGKSTLEVIMTKLHAGGKFDGKAYETSGGLHGVGVSVV 190
            +  +TV DNGRGIPV+ H +  G S  EVIMT LHAGGKFD  +Y+ SGGLHGVGVSVV
Sbjct: 67  PDESITVRDNGRGIPVDVHKE-EGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVV 125

Query: 191 NALSDLLEVEVARNRKLYRQRFSRGAPIGGLEELGDVHNRRGTRVRFHPDPQIFGDHAKF 250
           NALS+LL + V R+ K++ Q +  G P   ++ +G+  +  GT++ F P  + F  +  F
Sbjct: 126 NALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVGE-SDSTGTQIHFKPSAETF-KNIHF 183

Query: 251 EPARIFRMARSKAYLFGGVEIRWSCDPGMVPADGEIPEKAVFHFPGGLKDYLAATLGKEF 310
               + +  R  ++L  GV        G+V  D    ++ +F + GGL+ ++   L    
Sbjct: 184 SWDILAKRIRELSFLNSGV--------GIVLKDERSGKEELFKYEGGLRAFVEY-LNTNK 234

Query: 311 TVTREIFSGRTEKTGGHGALEWAVTWYGG-DTQIHSYCNTIPTPEGGTHEAGFRIALTKG 369
           T   E+F    ++  G G +E A+ W    +  +  + N IP  +GGTH  GFR ALT+ 
Sbjct: 235 TPVNEVFHFNIQRDDGIG-VEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRN 293

Query: 370 LKNYAELTQNKRAREITT--DDVMISAAGMLSVFIREPEFVGQTKDKLATVEAQRIVENA 427
           L NY E     +  ++ T  DD       ++SV + +P+F  QTKDKL + E +  VE  
Sbjct: 294 LNNYIEQEGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQE 353

Query: 428 LRDPFDHYLTGNPGEAAKLLDWVIERAEERLRRRKEKEVNR-KTAVRKLRLPGKLADCSQ 486
           +   F  +L  NP EA  ++  +I+ A  R   RK +E+ R K A+    LPGKLADC +
Sbjct: 354 MGKYFSDFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQE 413

Query: 487 NTAENAELFIVEGDSAGGSAKQARNRANQAILPLRGKILNVGSASREKLSANQQIADLIQ 546
                +EL++VEGDSAGGSAKQ RNR  QAILPL+GKILNV  A  +K+ ++Q++  LI 
Sbjct: 414 KDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLIT 473

Query: 547 ALGCGT-RTKYREEDLRYERIIIMTDADVDGAHIASLLITFFYQEMPELIRGNHLYLAVP 605
           ALGCG  R +Y  + LRY  IIIMTDADVDG+HI +LL+TFF++++PELI   ++Y+A P
Sbjct: 474 ALGCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQP 533

Query: 606 PLYVIRQGAKSAYARDDAHRAELM 629
           PLY +++G +  Y +DD    E M
Sbjct: 534 PLYKVKKGKQEQYIKDDEAMEEYM 557



 Score = 56.6 bits (135), Expect = 5e-12
 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 636 KKVEIGRFKGLGEMMAAQLKETTMDPEKRTLLRVEIDDVDFEGTREAVDNLMGTKADARF 695
           K+  I R+KGLGEM   QL ETTMDP  R +L+V I+D    G  +  + LMG   + R 
Sbjct: 733 KRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDA--IGADQIFNTLMGDAVEPRR 790

Query: 696 RFIQERAAFADNLD 709
            FI+  A    NLD
Sbjct: 791 DFIESNALAVSNLD 804