Pairwise Alignments

Query, 578 a.a., CTP synthase from Agrobacterium fabrum C58

Subject, 545 a.a., CTP synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  643 bits (1658), Expect = 0.0
 Identities = 325/537 (60%), Positives = 402/537 (74%), Gaps = 6/537 (1%)

Query: 39  RYVFITGGVVSSLGKGIAAAALGALLQSRGYRVRLRKLDPYLNVDPGTMSPTQHGEVFVT 98
           RY+F+TGGVVSSLGKGIAAA+L A+L++RG  V + KLDPY+N+DPGTMSPTQHGEVFVT
Sbjct: 4   RYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINLDPGTMSPTQHGEVFVT 63

Query: 99  DDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTNEI 158
           +DGAETDLDLGHYERF      + +N TTGRIY+ ++ KERRGDYLGAT+QVIPH+TN I
Sbjct: 64  EDGAETDLDLGHYERFIRTKMNRRNNFTTGRIYEEVLRKERRGDYLGATIQVIPHITNAI 123

Query: 159 KDFVTEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLPRGTAIYVHLTLMPYIPAA 218
           K+ V EG + +D  I EIGGTVGDIE++PF+E+IRQLG +L R   +++HLTL+P++ AA
Sbjct: 124 KEKVLEGGEGHDVAIVEIGGTVGDIESLPFLESIRQLGVELGRDRTLFMHLTLVPFLGAA 183

Query: 219 GELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQALDVAN 278
           GE+KTKPTQHSVKEL+++GI PD+L+ R DR IP  E+ K+SLFCNV   AVI   DV +
Sbjct: 184 GEVKTKPTQHSVKELRSIGIAPDVLVCRGDRAIPSNEKAKISLFCNVEERAVISLKDVDS 243

Query: 279 IYDVPIAYHNEGLDSEVLAAFGIEPAPKPRLEQWEEVCNRIRTPEGEVTIAIVGKYTGLK 338
           IY +P     +GLD  V   FG+E   +  L +WE V  +   P GEVTI +VGKYT L 
Sbjct: 244 IYKIPALLKAQGLDDLVTKRFGLE-CREADLSEWENVIYQEANPTGEVTIGMVGKYTELP 302

Query: 339 DAYKSLIEALHHGGFANRVKVKLEWIESEVFEKEDPTPYLEKVNGILVPGGFGERGSEGK 398
           DAYKS+ EAL H G  NRV V +++I+S+  E +  T  LE ++GILVPGGFGERG EGK
Sbjct: 303 DAYKSVNEALKHAGLFNRVSVNIKYIDSQNIEAKG-TEVLEGLDGILVPGGFGERGVEGK 361

Query: 399 IMAAQFARERNVPYFGICFGMQMAVVEAARHLAGIENASSTEFG-PTAEPVVGLMTEWV- 456
           IMAAQ+ARE N+PYFGIC GMQ+A++E ARH+AG+ENA STEF   T  PVVGL+TEW+ 
Sbjct: 362 IMAAQYARENNLPYFGICLGMQVALIEFARHVAGLENAHSTEFNKDTPHPVVGLITEWID 421

Query: 457 -KGNELEKRSTKGDLGGTMRLGAYKAALKKDTKIAEIYGTTDISERHRHRYEVNVDYKDR 515
            KGN +E+R  + DLGGTMRLGA    L + TK AE Y      ERHRHRYEVN  Y++R
Sbjct: 422 EKGN-IEQRHEESDLGGTMRLGAQLCHLIEGTKAAEAYKGLTCVERHRHRYEVNNTYRER 480

Query: 516 LEECGLVFSGMSPDGVLPETVEYPDHPWFIGVQYHPELKSRPLDPHPLFASFVEAAV 572
           LE+ GLVFSG+S D  L E +E P+HPWF+  Q+HPE  S P D  PLF  FV AAV
Sbjct: 481 LEKAGLVFSGLSTDRQLVEMIELPNHPWFVAGQFHPEFTSTPRDGQPLFQGFVAAAV 537